Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   STER_RS04760 Genome accession   NC_008532
Coordinates   891614..891802 (+) Length   62 a.a.
NCBI ID   WP_164177824.1    Uniprot ID   -
Organism   Streptococcus thermophilus LMD-9     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 886614..896802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STER_RS04740 (STER_0960) - 887224..888882 (-) 1659 WP_011681101.1 Rqc2 family fibronectin-binding protein -
  STER_RS04745 (STER_0961) - 889205..890161 (+) 957 WP_014727508.1 DUF6994 family protein -
  STER_RS04750 (STER_0962) - 890467..890952 (+) 486 WP_011681103.1 NUDIX hydrolase -
  STER_RS04755 (STER_0963) - 890956..891147 (+) 192 WP_011681104.1 hypothetical protein -
  STER_RS04760 (STER_0964) prx 891614..891802 (+) 189 WP_164177824.1 hypothetical protein Regulator
  STER_RS04765 (STER_0965) - 892004..892672 (+) 669 WP_011681106.1 TraX family protein -
  STER_RS12240 - 892676..892897 (+) 222 WP_224102972.1 conjugal transfer protein TraX -
  STER_RS04770 (STER_0966) - 892939..893487 (+) 549 WP_011225930.1 DJ-1 family glyoxalase III -
  STER_RS04775 (STER_0967) - 893544..893759 (-) 216 WP_011681107.1 hypothetical protein -
  STER_RS04780 (STER_0968) - 893758..894531 (+) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  STER_RS04785 (STER_0969) - 894550..895497 (+) 948 WP_011681109.1 dihydroorotate dehydrogenase -
  STER_RS04790 (STER_0970) cas1 895636..896640 (+) 1005 WP_011681110.1 CRISPR-associated endonuclease Cas1 -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7063.97 Da        Isoelectric Point: 4.4205

>NTDB_id=26661 STER_RS04760 WP_164177824.1 891614..891802(+) (prx) [Streptococcus thermophilus LMD-9]
MLTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 189 bp        

>NTDB_id=26661 STER_RS04760 WP_164177824.1 891614..891802(+) (prx) [Streptococcus thermophilus LMD-9]
ATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACGAAATATTGAGCTTAGAAAAGGTATCGGATA
TAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

60.345

93.548

0.565
  prx Streptococcus pyogenes MGAS8232

59.322

95.161

0.565
  prx Streptococcus pyogenes MGAS315

57.627

95.161

0.548
  prx Streptococcus pyogenes MGAS315

56.897

93.548

0.532
  prx Streptococcus pyogenes MGAS315

74.419

69.355

0.516
  prx Streptococcus pyogenes MGAS315

68.182

70.968

0.484
  prx Streptococcus pyogenes MGAS315

70.732

66.129

0.468

Multiple sequence alignment