Detailed information NTG0265764

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: C2H97_RS05495
• Genome accession: NZ_CP026038
• Coordinates: 1028298..1028891 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis PY79 strain PK1_3
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1023298..1033891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H97_RS05465 (C2H97_05485)	aspP	1024271..1025833 (+)	1563	WP_003228228.1	aspartate/proton symporter AspP	-
C2H97_RS05470 (C2H97_05490)	-	1025928..1026512 (+)	585	WP_182913308.1	TetR family transcriptional regulator	-
C2H97_RS05475 (C2H97_05495)	psmA	1026594..1026929 (+)	336	WP_120027520.1	SMR family transporter	-
C2H97_RS05480 (C2H97_05500)	psmB	1026929..1027249 (+)	321	WP_021480661.1	QacE family quaternary ammonium compound efflux SMR transporter	-
C2H97_RS05485 (C2H97_05505)	yvdQ	1027285..1027797 (-)	513	WP_120027521.1	DUF3231 family protein	-
C2H97_RS05495 (C2H97_05515)	clpP	1028298..1028891 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
C2H97_RS05500 (C2H97_05520)	pgmB	1028936..1029610 (-)	675	WP_249847966.1	beta-phosphoglucomutase	-
C2H97_RS05505 (C2H97_05525)	malL	1029607..1031292 (-)	1686	WP_249847965.1	oligo-1,6-glucosidase	-
C2H97_RS05510 (C2H97_05530)	mdxK	1031285..1033558 (-)	2274	WP_249848459.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=265764 C2H97_RS05495 WP_003228214.1 1028298..1028891(+) (clpP) [Bacillus subtilis PY79 strain PK1_3]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=265764 C2H97_RS05495 WP_003228214.1 1028298..1028891(+) (clpP) [Bacillus subtilis PY79 strain PK1_3]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGTGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538