Detailed information NTG0262327

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: C0J00_RS00810
• Genome accession: NZ_CP025536
• Coordinates: 146340..146795 (+)
• Length: 151 a.a.
• NCBI ID: WP_407697186.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain TH11417
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 141340..151795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0J00_RS00780 (C0J00_00780)	-	143070..143450 (+)	381	WP_205407082.1	DUF1033 family protein	-
C0J00_RS00785 (C0J00_00785)	comYA	143513..144466 (+)	954	WP_104967105.1	competence type IV pilus ATPase ComGA	Machinery gene
C0J00_RS00790 (C0J00_00790)	comYB	144390..145418 (+)	1029	WP_199773983.1	competence type IV pilus assembly protein ComGB	Machinery gene
C0J00_RS00795 (C0J00_00795)	comYC	145419..145712 (+)	294	WP_104967106.1	competence type IV pilus major pilin ComGC	Machinery gene
C0J00_RS00800 (C0J00_00800)	comGD	145693..146109 (+)	417	WP_104967107.1	competence type IV pilus minor pilin ComGD	-
C0J00_RS00805 (C0J00_00805)	comGE	146081..146380 (+)	300	WP_104967108.1	competence type IV pilus minor pilin ComGE	-
C0J00_RS00810 (C0J00_00810)	comYF	146340..146795 (+)	456	WP_407697186.1	competence type IV pilus minor pilin ComGF	Machinery gene
C0J00_RS00815 (C0J00_00815)	comGG	146779..147174 (+)	396	WP_199773973.1	competence type IV pilus minor pilin ComGG	-
C0J00_RS00820 (C0J00_00820)	comYH	147217..148170 (+)	954	WP_104967110.1	class I SAM-dependent methyltransferase	Machinery gene
C0J00_RS00825 (C0J00_00825)	-	148231..149421 (+)	1191	WP_104967111.1	acetate kinase	-
C0J00_RS00830 (C0J00_00830)	-	149807..150004 (+)	198	WP_104967112.1	helix-turn-helix transcriptional regulator	-
C0J00_RS00835 (C0J00_00835)	-	150017..150469 (+)	453	WP_104967113.1	hypothetical protein	-
C0J00_RS00840 (C0J00_00840)	-	150503..150814 (+)	312	WP_104967114.1	CPBP family intramembrane glutamic endopeptidase	-
C0J00_RS00845 (C0J00_00845)	proC	150859..151629 (-)	771	WP_104967115.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 151 a.a.
• Molecular weight: 17691.55 Da
• Isoelectric Point: 10.3810

>NTDB_id=262327 C0J00_RS00810 WP_407697186.1 146340..146795(+) (comYF) [Streptococcus pluranimalium strain TH11417]
MRRRFFVLKHYHLKAFTLMECLLALLVLSGSIQVYQAMTKVTSTHVRELSQPKDQDWLLFCQQFRSELAGSQLVKVSDDR
LVILKNTQTLAFGKSKKEDFRKTSGDGRGFQPMIYSIESAHFRRFNQTISVQLIFKDGRVREFLYAFEKET

Nucleotide

• Length: 456 bp

>NTDB_id=262327 C0J00_RS00810 WP_407697186.1 146340..146795(+) (comYF) [Streptococcus pluranimalium strain TH11417]
ATGAGAAGGAGATTTTTCGTGTTAAAGCATTATCACCTTAAGGCATTCACCTTGATGGAGTGTTTGCTGGCATTACTGGT
TCTATCGGGCTCCATACAGGTATACCAAGCCATGACTAAGGTGACTTCAACTCATGTTCGAGAACTCAGCCAACCTAAAG
ATCAGGACTGGTTGCTCTTTTGCCAGCAATTTCGCTCAGAATTAGCAGGTTCTCAGTTGGTTAAAGTTTCTGATGATAGA
TTAGTCATCTTAAAAAATACCCAAACCTTGGCTTTTGGTAAATCGAAAAAAGAGGATTTTCGTAAAACGAGCGGCGATGG
TCGCGGCTTTCAACCTATGATTTATAGTATAGAGTCAGCTCATTTTAGGCGGTTTAATCAGACCATCAGTGTTCAACTCA
TTTTTAAAGATGGAAGGGTGCGTGAGTTTCTCTATGCTTTTGAAAAAGAGACTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (43-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA159	54.676	92.053	0.503
comYF	Streptococcus mutans UA140	53.957	92.053	0.497
comGF/cglF	Streptococcus mitis NCTC 12261	43.972	93.377	0.411
comGF/cglF	Streptococcus pneumoniae Rx1	43.662	94.04	0.411
comGF/cglF	Streptococcus pneumoniae D39	43.662	94.04	0.411
comGF/cglF	Streptococcus pneumoniae R6	43.662	94.04	0.411
comGF/cglF	Streptococcus pneumoniae TIGR4	43.662	94.04	0.411
comGF/cglF	Streptococcus mitis SK321	41.135	93.377	0.384