Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | C0J00_RS00820 | Genome accession | NZ_CP025536 |
| Coordinates | 147217..148170 (+) | Length | 317 a.a. |
| NCBI ID | WP_104967110.1 | Uniprot ID | A0A2L0D1T1 |
| Organism | Streptococcus pluranimalium strain TH11417 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 142217..153170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0J00_RS00780 (C0J00_00780) | - | 143070..143450 (+) | 381 | WP_205407082.1 | DUF1033 family protein | - |
| C0J00_RS00785 (C0J00_00785) | comYA | 143513..144466 (+) | 954 | WP_104967105.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C0J00_RS00790 (C0J00_00790) | comYB | 144390..145418 (+) | 1029 | WP_199773983.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C0J00_RS00795 (C0J00_00795) | comYC | 145419..145712 (+) | 294 | WP_104967106.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C0J00_RS00800 (C0J00_00800) | comGD | 145693..146109 (+) | 417 | WP_104967107.1 | competence type IV pilus minor pilin ComGD | - |
| C0J00_RS00805 (C0J00_00805) | comGE | 146081..146380 (+) | 300 | WP_104967108.1 | competence type IV pilus minor pilin ComGE | - |
| C0J00_RS00810 (C0J00_00810) | comYF | 146340..146795 (+) | 456 | WP_407697186.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| C0J00_RS00815 (C0J00_00815) | comGG | 146779..147174 (+) | 396 | WP_199773973.1 | competence type IV pilus minor pilin ComGG | - |
| C0J00_RS00820 (C0J00_00820) | comYH | 147217..148170 (+) | 954 | WP_104967110.1 | class I SAM-dependent methyltransferase | Machinery gene |
| C0J00_RS00825 (C0J00_00825) | - | 148231..149421 (+) | 1191 | WP_104967111.1 | acetate kinase | - |
| C0J00_RS00830 (C0J00_00830) | - | 149807..150004 (+) | 198 | WP_104967112.1 | helix-turn-helix transcriptional regulator | - |
| C0J00_RS00835 (C0J00_00835) | - | 150017..150469 (+) | 453 | WP_104967113.1 | hypothetical protein | - |
| C0J00_RS00840 (C0J00_00840) | - | 150503..150814 (+) | 312 | WP_104967114.1 | CPBP family intramembrane glutamic endopeptidase | - |
| C0J00_RS00845 (C0J00_00845) | proC | 150859..151629 (-) | 771 | WP_104967115.1 | pyrroline-5-carboxylate reductase | - |
| C0J00_RS00850 (C0J00_00850) | pepA | 151669..152733 (-) | 1065 | WP_104967116.1 | glutamyl aminopeptidase | - |
| C0J00_RS00855 (C0J00_00855) | - | 152878..153078 (-) | 201 | WP_104967117.1 | cold-shock protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35721.55 Da Isoelectric Point: 4.3566
>NTDB_id=262328 C0J00_RS00820 WP_104967110.1 147217..148170(+) (comYH) [Streptococcus pluranimalium strain TH11417]
MNFEKIESAYQLILENTQLIENDIKTNIYDALIEQNAFYLGAENAPTKVAENNQALKDLQLSKEEWRRAYQFVFIKASQT
EKLQANHQFTPDTIGFLVLYLLENLTSQEHLDVIEIGSGTGNLAQTLLNNSNRDLDYLGLELDDLLIDLSASIAEVMGAN
VSFVQEDAVRPQILKESDVIISDLPVGYYPNDAIAKRYQVAATDEHTYAHHLLMEQSLKYLKKDGLAILLAPTNLLTSGQ
SDLLKKWLAGYADILAVITLPETLFGNPANAKSLFVLQKQAKTKPETFVYHLSDIQNPEILQDFMENLKIWKDDNAI
MNFEKIESAYQLILENTQLIENDIKTNIYDALIEQNAFYLGAENAPTKVAENNQALKDLQLSKEEWRRAYQFVFIKASQT
EKLQANHQFTPDTIGFLVLYLLENLTSQEHLDVIEIGSGTGNLAQTLLNNSNRDLDYLGLELDDLLIDLSASIAEVMGAN
VSFVQEDAVRPQILKESDVIISDLPVGYYPNDAIAKRYQVAATDEHTYAHHLLMEQSLKYLKKDGLAILLAPTNLLTSGQ
SDLLKKWLAGYADILAVITLPETLFGNPANAKSLFVLQKQAKTKPETFVYHLSDIQNPEILQDFMENLKIWKDDNAI
Nucleotide
Download Length: 954 bp
>NTDB_id=262328 C0J00_RS00820 WP_104967110.1 147217..148170(+) (comYH) [Streptococcus pluranimalium strain TH11417]
ATGAATTTTGAAAAAATCGAATCAGCCTATCAGTTGATTTTAGAAAATACCCAGCTTATTGAAAATGACATTAAGACCAA
TATTTACGATGCTTTGATTGAGCAAAATGCCTTTTATTTGGGTGCTGAAAATGCTCCTACAAAAGTGGCTGAAAATAATC
AAGCCTTGAAAGATTTGCAACTGAGTAAAGAAGAATGGCGTCGTGCCTATCAGTTCGTTTTTATCAAGGCTAGTCAGACG
GAGAAACTTCAAGCCAATCATCAGTTTACACCAGATACGATTGGCTTCTTGGTACTTTATCTTTTGGAAAATTTGACCAG
TCAAGAGCATTTGGATGTGATTGAAATCGGTAGTGGTACTGGTAATTTGGCGCAAACCCTTCTCAATAATAGTAATCGTG
ATTTAGACTATCTCGGTTTGGAGTTGGATGATTTATTGATTGATTTATCAGCTTCGATCGCTGAAGTGATGGGAGCAAAT
GTTAGCTTCGTTCAAGAAGATGCAGTGCGTCCACAGATTTTGAAAGAGAGTGACGTCATCATCAGTGATTTACCAGTTGG
TTATTATCCGAATGACGCTATCGCTAAACGTTATCAAGTAGCTGCTACTGATGAGCATACTTATGCGCATCATCTCTTGA
TGGAGCAATCCTTGAAGTATTTGAAAAAAGATGGTCTAGCGATTCTTTTGGCACCGACTAATCTCTTAACTAGTGGGCAA
AGTGATCTCTTGAAAAAATGGTTGGCAGGTTATGCAGATATCTTGGCAGTGATTACCTTACCAGAAACTTTATTTGGTAA
TCCGGCTAATGCTAAATCTCTGTTTGTCTTGCAAAAGCAGGCTAAAACTAAGCCGGAGACTTTTGTTTATCATTTGTCAG
ATATTCAAAATCCGGAAATTTTACAGGATTTTATGGAAAATTTGAAAATCTGGAAAGATGATAATGCCATTTAG
ATGAATTTTGAAAAAATCGAATCAGCCTATCAGTTGATTTTAGAAAATACCCAGCTTATTGAAAATGACATTAAGACCAA
TATTTACGATGCTTTGATTGAGCAAAATGCCTTTTATTTGGGTGCTGAAAATGCTCCTACAAAAGTGGCTGAAAATAATC
AAGCCTTGAAAGATTTGCAACTGAGTAAAGAAGAATGGCGTCGTGCCTATCAGTTCGTTTTTATCAAGGCTAGTCAGACG
GAGAAACTTCAAGCCAATCATCAGTTTACACCAGATACGATTGGCTTCTTGGTACTTTATCTTTTGGAAAATTTGACCAG
TCAAGAGCATTTGGATGTGATTGAAATCGGTAGTGGTACTGGTAATTTGGCGCAAACCCTTCTCAATAATAGTAATCGTG
ATTTAGACTATCTCGGTTTGGAGTTGGATGATTTATTGATTGATTTATCAGCTTCGATCGCTGAAGTGATGGGAGCAAAT
GTTAGCTTCGTTCAAGAAGATGCAGTGCGTCCACAGATTTTGAAAGAGAGTGACGTCATCATCAGTGATTTACCAGTTGG
TTATTATCCGAATGACGCTATCGCTAAACGTTATCAAGTAGCTGCTACTGATGAGCATACTTATGCGCATCATCTCTTGA
TGGAGCAATCCTTGAAGTATTTGAAAAAAGATGGTCTAGCGATTCTTTTGGCACCGACTAATCTCTTAACTAGTGGGCAA
AGTGATCTCTTGAAAAAATGGTTGGCAGGTTATGCAGATATCTTGGCAGTGATTACCTTACCAGAAACTTTATTTGGTAA
TCCGGCTAATGCTAAATCTCTGTTTGTCTTGCAAAAGCAGGCTAAAACTAAGCCGGAGACTTTTGTTTATCATTTGTCAG
ATATTCAAAATCCGGAAATTTTACAGGATTTTATGGAAAATTTGAAAATCTGGAAAGATGATAATGCCATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
67.089 |
99.685 |
0.669 |
| comYH | Streptococcus mutans UA159 |
66.772 |
99.685 |
0.666 |