Detailed information NTG0257593

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: CWI26_RS00835
• Genome accession: NZ_CP025043
• Coordinates: 136329..136763 (+)
• Length: 144 a.a.
• NCBI ID: WP_100881039.1
• Uniprot ID: -
• Organism: Streptococcus suis strain AH681
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 131329..141763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWI26_RS00800 (CWI26_00800)	-	131967..132326 (+)	360	WP_044776736.1	DUF1033 family protein	-
CWI26_RS00805 (CWI26_00805)	-	132471..133421 (-)	951	WP_100881035.1	S66 family peptidase	-
CWI26_RS00810 (CWI26_00810)	comYA	133507..134457 (+)	951	WP_044760311.1	competence type IV pilus ATPase ComGA	Machinery gene
CWI26_RS00815 (CWI26_00815)	comYB	134369..135406 (+)	1038	WP_233486262.1	competence type IV pilus assembly protein ComGB	Machinery gene
CWI26_RS00820 (CWI26_00820)	comYC	135408..135689 (+)	282	WP_044760307.1	competence type IV pilus major pilin ComGC	Machinery gene
CWI26_RS00825 (CWI26_00825)	comGD	135670..136077 (+)	408	WP_100881037.1	competence type IV pilus minor pilin ComGD	-
CWI26_RS00830 (CWI26_00830)	comYE	136049..136342 (+)	294	WP_100881038.1	competence type IV pilus minor pilin ComGE	Machinery gene
CWI26_RS00835 (CWI26_00835)	comGF/cglF	136329..136763 (+)	435	WP_100881039.1	competence type IV pilus minor pilin ComGF	Machinery gene
CWI26_RS00840 (CWI26_00840)	comGG	136741..137268 (+)	528	WP_029180264.1	competence type IV pilus minor pilin ComGG	-
CWI26_RS00845 (CWI26_00845)	comYH	137325..138278 (+)	954	WP_100881040.1	class I SAM-dependent methyltransferase	Machinery gene
CWI26_RS00850 (CWI26_00850)	-	138328..139515 (+)	1188	WP_100881041.1	acetate kinase	-
CWI26_RS00860 (CWI26_00860)	-	139829..140380 (+)	552	WP_100881043.1	folate family ECF transporter S component	-
CWI26_RS00865 (CWI26_00865)	-	140436..141698 (+)	1263	WP_100881044.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16478.80 Da
• Isoelectric Point: 6.9825

>NTDB_id=257593 CWI26_RS00835 WP_100881039.1 136329..136763(+) (comGF/cglF) [Streptococcus suis strain AH681]
MLKSKIPAFTLLECLVALVILSGSLLVFESLSKLLVQEAHYQNQTIQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKDG
QALAFGKSRSDDFRKTNDKGQGYQPMIYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=257593 CWI26_RS00835 WP_100881039.1 136329..136763(+) (comGF/cglF) [Streptococcus suis strain AH681]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTGGTCATCCTGTCAGGCAGTTTATTGGT
CTTTGAAAGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAAATCAAACTATTCAAAAGGAGTGGCTGGTCTTTT
CTAGCCAGTTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAATAAGGATGGA
CAGGCTTTAGCCTTTGGCAAGTCACGTTCGGATGATTTTCGGAAAACCAATGATAAGGGACAGGGCTACCAGCCTATGAT
TTATCAGGTGGACAGCGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	55.224	93.056	0.514
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458