Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | AM489_RS06610 | Genome accession | NZ_CP029745 |
| Coordinates | 1397003..1397527 (+) | Length | 174 a.a. |
| NCBI ID | WP_003095836.1 | Uniprot ID | G3XCX7 |
| Organism | Pseudomonas aeruginosa strain AR_0110 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1392003..1402527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM489_RS06590 (AM489_06590) | - | 1392073..1394541 (-) | 2469 | WP_003114576.1 | penicillin-binding protein 1A | - |
| AM489_RS06595 (AM489_06595) | pilM | 1394726..1395790 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| AM489_RS06600 (AM489_06600) | pilN | 1395790..1396386 (+) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| AM489_RS06605 (AM489_06605) | pilO | 1396383..1397006 (+) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AM489_RS06610 (AM489_06610) | comL/pilP | 1397003..1397527 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| AM489_RS06615 (AM489_06615) | pilQ | 1397581..1399725 (+) | 2145 | WP_003146401.1 | type 4a pilus secretin PilQ | Machinery gene |
| AM489_RS06620 (AM489_06620) | aroK | 1399737..1400255 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| AM489_RS06625 (AM489_06625) | aroB | 1400305..1401411 (+) | 1107 | WP_003162482.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19053.84 Da Isoelectric Point: 9.4114
>NTDB_id=257358 AM489_RS06610 WP_003095836.1 1397003..1397527(+) (comL/pilP) [Pseudomonas aeruginosa strain AR_0110]
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=257358 AM489_RS06610 WP_003095836.1 1397003..1397527(+) (comL/pilP) [Pseudomonas aeruginosa strain AR_0110]
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGGCCCAAGGGCACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGACGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGGCCCAAGGGCACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGACGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.416 |
99.425 |
0.362 |