Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DMC40_RS02110 Genome accession   NZ_CP029694
Coordinates   366256..366438 (+) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ABC020055975     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 361256..371438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMC40_RS02075 (DMC40_02075) - 361512..362129 (+) 618 WP_011184056.1 DUF1366 domain-containing protein -
  DMC40_RS02080 (DMC40_02080) - 362139..362411 (+) 273 WP_002986916.1 hypothetical protein -
  DMC40_RS02085 (DMC40_02085) - 362408..362635 (+) 228 WP_000609113.1 phage holin -
  DMC40_RS02090 (DMC40_02090) - 362757..363509 (+) 753 WP_011184910.1 CHAP domain-containing protein -
  DMC40_RS02095 (DMC40_02095) - 363800..364771 (+) 972 WP_011888780.1 Abi family protein -
  DMC40_RS02100 (DMC40_02100) - 364956..365156 (+) 201 WP_003058228.1 CsbD family protein -
  DMC40_RS02105 (DMC40_02105) - 365218..366018 (-) 801 WP_021340119.1 DNA/RNA non-specific endonuclease -
  DMC40_RS02110 (DMC40_02110) prx 366256..366438 (+) 183 WP_011184907.1 hypothetical protein Regulator
  DMC40_RS02115 (DMC40_02115) uvrA 366652..369480 (+) 2829 WP_011054967.1 excinuclease ABC subunit UvrA Machinery gene
  DMC40_RS02120 (DMC40_02120) - 369596..370669 (+) 1074 WP_011054966.1 Xaa-Pro peptidase family protein -
  DMC40_RS02125 (DMC40_02125) - 370704..371165 (+) 462 WP_002988493.1 deaminase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=257069 DMC40_RS02110 WP_011184907.1 366256..366438(+) (prx) [Streptococcus pyogenes strain ABC020055975]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=257069 DMC40_RS02110 WP_011184907.1 366256..366438(+) (prx) [Streptococcus pyogenes strain ABC020055975]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55