Detailed information NTG0255840

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: CTW00_RS10040
• Genome accession: NZ_CP024843
• Coordinates: 2066595..2067185 (-)
• Length: 196 a.a.
• NCBI ID: WP_003101547.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain FP5228
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2061595..2072185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTW00_RS10010 (CTW00_02030)	-	2062178..2063131 (-)	954	WP_016356098.1	branched-chain amino acid ABC transporter permease	-
CTW00_RS10015 (CTW00_02031)	-	2063135..2064004 (-)	870	WP_016356099.1	branched-chain amino acid ABC transporter permease	-
CTW00_RS10020 (CTW00_02032)	-	2064064..2065236 (-)	1173	WP_003101539.1	ABC transporter substrate-binding protein	-
CTW00_RS10025 (CTW00_02033)	-	2065375..2065653 (-)	279	WP_003101541.1	YlbG family protein	-
CTW00_RS10030 (CTW00_02034)	-	2065629..2066099 (-)	471	WP_016356100.1	YlbF family regulator	-
CTW00_RS10035 (CTW00_02035)	-	2066228..2066473 (-)	246	WP_003101546.1	hypothetical protein	-
CTW00_RS10040 (CTW00_02036)	clpP	2066595..2067185 (-)	591	WP_003101547.1	ATP-dependent Clp protease proteolytic subunit	Regulator
CTW00_RS10045 (CTW00_02037)	upp	2067413..2068042 (-)	630	WP_003101549.1	uracil phosphoribosyltransferase	-
CTW00_RS10050 (CTW00_02038)	-	2068187..2069839 (-)	1653	WP_003101552.1	polysaccharide biosynthesis protein	-
CTW00_RS10055 (CTW00_02039)	-	2069927..2071372 (+)	1446	WP_003101555.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21691.01 Da
• Isoelectric Point: 6.6494

>NTDB_id=255840 CTW00_RS10040 WP_003101547.1 2066595..2067185(-) (clpP) [Streptococcus iniae strain FP5228]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDHTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILAKNSGK
TIKQVHKDAERDYWMSAEETLKYGFIDEIMENNKLK

Nucleotide

• Length: 591 bp

>NTDB_id=255840 CTW00_RS10040 WP_003101547.1 2066595..2067185(-) (clpP) [Streptococcus iniae strain FP5228]
ATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGGGAGCGTTCTTACGATATTTACTCTCGTTTACTAAAAGATCGGAT
CATCATGTTAACTGGTCCGGTCGAAGACAATATGGCTAACTCTGTCATTGCACAGTTGCTTTTTTTGGATGCACAAGATC
ACACTAAAGATATTTATCTTTATGTTAATACCCCAGGTGGTTCCGTTTCTGCTGGTTTAGCCATTGTTGATACAATGAAC
TTTATTAAATCTGATGTTCAAACAATTGTCATGGGAATGGCTGCTTCCATGGGAACAATCATTGCCTCATCAGGGACTAA
AGGGAAACGGTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACGCAGCAAT
CAGATATGGCAATTGCTGCTGAACATCTCTTAAAAACACGTCACACTCTTGAAAAAATATTGGCAAAAAATAGTGGAAAA
ACCATTAAACAAGTTCATAAAGATGCAGAACGTGATTATTGGATGAGTGCAGAAGAAACACTAAAATATGGCTTCATTGA
TGAAATTATGGAAAATAACAAACTTAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	94.898	100	0.949
clpP	Streptococcus pyogenes JRS4	94.898	100	0.949
clpP	Streptococcus mutans UA159	91.837	100	0.918
clpP	Streptococcus thermophilus LMD-9	90.816	100	0.908
clpP	Streptococcus thermophilus LMG 18311	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.306	100	0.903
clpP	Streptococcus pneumoniae D39	90.306	100	0.903
clpP	Streptococcus pneumoniae R6	90.306	100	0.903
clpP	Streptococcus pneumoniae TIGR4	90.306	100	0.903
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.714	100	0.857
clpP	Lactococcus lactis subsp. cremoris KW2	85.204	100	0.852
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.477	98.469	0.556
clpP	Bacillus subtilis subsp. subtilis str. 168	56.842	96.939	0.551