Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CSW12_RS27530 | Genome accession | NZ_CP024655 |
| Coordinates | 5282954..5283238 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus cereus strain MLY1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5277954..5288238
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSW12_RS27495 (CSW12_27570) | tmk | 5278146..5278772 (+) | 627 | WP_000677220.1 | dTMP kinase | - |
| CSW12_RS27500 (CSW12_27575) | holB | 5278808..5279791 (+) | 984 | WP_000978578.1 | DNA polymerase III subunit delta' | - |
| CSW12_RS27505 (CSW12_27580) | - | 5279797..5280624 (+) | 828 | WP_000272429.1 | PSP1 domain-containing protein | - |
| CSW12_RS27510 (CSW12_27585) | yabA | 5280639..5280989 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| CSW12_RS27515 (CSW12_27590) | - | 5281072..5281812 (+) | 741 | WP_001055355.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CSW12_RS27520 (CSW12_27595) | - | 5281799..5282089 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| CSW12_RS27525 (CSW12_27600) | rsmI | 5282058..5282933 (+) | 876 | WP_000267824.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CSW12_RS27530 (CSW12_27605) | abrB | 5282954..5283238 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CSW12_RS27535 (CSW12_27610) | metG | 5283726..5285708 (+) | 1983 | WP_232733559.1 | methionine--tRNA ligase | - |
| CSW12_RS27540 (CSW12_27615) | - | 5285875..5286642 (+) | 768 | WP_000895840.1 | TatD family hydrolase | - |
| CSW12_RS27545 (CSW12_27620) | rnmV | 5286858..5287415 (+) | 558 | WP_000692837.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=254848 CSW12_RS27530 WP_000843036.1 5282954..5283238(-) (abrB) [Bacillus cereus strain MLY1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=254848 CSW12_RS27530 WP_000843036.1 5282954..5283238(-) (abrB) [Bacillus cereus strain MLY1]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGACTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGACTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |