Detailed information NTG0254574

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CS557_RS01545
• Genome accession: NZ_CP024632
• Coordinates: 328916..329974 (+)
• Length: 352 a.a.
• NCBI ID: WP_004951546.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain lzh-X15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 323916..334974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS557_RS01530 (CS557_01535)	mraY	324168..325286 (+)	1119	WP_004909640.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
CS557_RS01535 (CS557_01540)	-	325341..326159 (+)	819	WP_004951542.1	putative RNA methyltransferase	-
CS557_RS01540 (CS557_01545)	ponA	326174..328753 (-)	2580	WP_099947980.1	penicillin-binding protein PBP1a	-
CS557_RS01545 (CS557_01550)	pilM	328916..329974 (+)	1059	WP_004951546.1	pilus assembly protein PilM	Machinery gene
CS557_RS01550 (CS557_01555)	pilN	329974..330618 (+)	645	WP_004909633.1	PilN domain-containing protein	Machinery gene
CS557_RS01555 (CS557_01560)	pilO	330615..331355 (+)	741	WP_099947981.1	type 4a pilus biogenesis protein PilO	Machinery gene
CS557_RS01560 (CS557_01565)	pilP	331355..331882 (+)	528	WP_004909624.1	pilus assembly protein PilP	Machinery gene
CS557_RS01565 (CS557_01570)	pilQ	331944..334076 (+)	2133	WP_412778900.1	type IV pilus secretin PilQ	Machinery gene
CS557_RS01570 (CS557_01575)	aroK	334096..334656 (+)	561	WP_004909618.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39046.77 Da
• Isoelectric Point: 4.5976

>NTDB_id=254574 CS557_RS01545 WP_004951546.1 328916..329974(+) (pilM) [Acinetobacter junii strain lzh-X15]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYALMPLPENSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLADRLANPNRVNVLLVATRTENVDSRVEVLEL
AGLKAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSFEE
AGRAKKERSLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=254574 CS557_RS01545 WP_004951546.1 328916..329974(+) (pilM) [Acinetobacter junii strain lzh-X15]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACTACTGTTAAGTTATTGGAACT
CTCTGTTAAGAACGGTCGATATTGGGTTGAAAGTTATGCATTGATGCCACTACCTGAAAATAGTGTGGTTGAGAAAAGCA
TTTTAAACCCAGAAGCAGTTGGCGACGCGCTTGAACGAGTTGTTAATCTTGCAAACCCTCACACTACCAATGTGGCTATT
GCCGTGCCTACTTCGATGGTCATTAATAAGATCATCGAGATGGATGCTGACATGACGGATGATGAACGGGAAGTTCAAAT
TCGTATGGATGCAGAGCAATATATTCCATTCCCATTAGATGAAGTTAGTTTGGACTTTGAAGTCTTAGCTGATCGATTGG
CAAATCCTAATCGTGTCAATGTGTTATTAGTCGCTACGCGTACTGAGAATGTCGATTCACGTGTTGAAGTTCTTGAGCTA
GCAGGTCTAAAGGCAAAGATTGCTGAAGTCGAAAGTTATGCGATGGAACGTGCTTTTAGTGTATTCGCTGATACGCTACC
TATGGGTGCGAATACAGTGGGTATTCTAGATATTGGGCATACGATGACGACGTTATCGGTCATGCAAAAAGGTAAAATTA
TCTATACTCGTGAGCAAGTATTTGGTGGAAAACAACTTACTCAAGACGTTCAAAATCGCTATGGTTTATCTTTTGAAGAA
GCTGGTCGAGCTAAAAAAGAAAGAAGTTTGCCAGATGATTACGATACTGAAGTTTTAGAACCGTTTCTTGATGCAGTTGT
GCAACAAGCCGCACGTTCGCTGCAATTCTTTTTCTCATCGTCTCAATTTAATGAAATTGACCACATCCTGTTAGCAGGTG
GTAATGCCAATATTCCAGGTCTAGCTAAACTATTGCAACAAAAGCTAGGTTATCGAGTAACGATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCCCAAATCGATATCAAAAAAATAGAAAATGATGCCTCATCGTTGATGGTGGCATGTGGATTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	88.352	100	0.884
comM	Acinetobacter nosocomialis M2	88.068	100	0.881
comM	Acinetobacter baylyi ADP1	83.523	100	0.835
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418