Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CS557_RS01550 | Genome accession | NZ_CP024632 |
| Coordinates | 329974..330618 (+) | Length | 214 a.a. |
| NCBI ID | WP_004909633.1 | Uniprot ID | S7WRY4 |
| Organism | Acinetobacter junii strain lzh-X15 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 324974..335618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS557_RS01535 (CS557_01540) | - | 325341..326159 (+) | 819 | WP_004951542.1 | putative RNA methyltransferase | - |
| CS557_RS01540 (CS557_01545) | ponA | 326174..328753 (-) | 2580 | WP_099947980.1 | penicillin-binding protein PBP1a | - |
| CS557_RS01545 (CS557_01550) | pilM | 328916..329974 (+) | 1059 | WP_004951546.1 | pilus assembly protein PilM | Machinery gene |
| CS557_RS01550 (CS557_01555) | pilN | 329974..330618 (+) | 645 | WP_004909633.1 | PilN domain-containing protein | Machinery gene |
| CS557_RS01555 (CS557_01560) | pilO | 330615..331355 (+) | 741 | WP_099947981.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CS557_RS01560 (CS557_01565) | pilP | 331355..331882 (+) | 528 | WP_004909624.1 | pilus assembly protein PilP | Machinery gene |
| CS557_RS01565 (CS557_01570) | pilQ | 331944..334076 (+) | 2133 | WP_412778900.1 | type IV pilus secretin PilQ | Machinery gene |
| CS557_RS01570 (CS557_01575) | aroK | 334096..334656 (+) | 561 | WP_004909618.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23774.17 Da Isoelectric Point: 5.1372
>NTDB_id=254575 CS557_RS01550 WP_004909633.1 329974..330618(+) (pilN) [Acinetobacter junii strain lzh-X15]
MAKINLLPWRDELREQRKKQFIAYCVGVAALGVASVLAGWGYLDYKLNDQEQANQLIVSTNQNLDAQLKSLDGLQERRNA
IIERMKLIQGLQGQRPVAVRLIDELVRVTPPTMYLTKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKTVSSLIPRIEENYGSFVVTVDLGEIGTTVEADPLAETVASGTVGAAQ
MAKINLLPWRDELREQRKKQFIAYCVGVAALGVASVLAGWGYLDYKLNDQEQANQLIVSTNQNLDAQLKSLDGLQERRNA
IIERMKLIQGLQGQRPVAVRLIDELVRVTPPTMYLTKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKTVSSLIPRIEENYGSFVVTVDLGEIGTTVEADPLAETVASGTVGAAQ
Nucleotide
Download Length: 645 bp
>NTDB_id=254575 CS557_RS01550 WP_004909633.1 329974..330618(+) (pilN) [Acinetobacter junii strain lzh-X15]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAACAATTTATTGCATATTGTGTAGG
GGTTGCTGCATTAGGTGTGGCATCGGTTTTGGCAGGATGGGGTTATCTTGATTACAAATTAAATGATCAAGAACAAGCGA
ACCAACTGATTGTGAGCACAAATCAAAATCTTGATGCACAATTAAAATCCTTAGATGGCTTGCAAGAGCGACGTAATGCA
ATTATTGAACGGATGAAACTCATTCAAGGTTTGCAAGGTCAAAGACCTGTTGCTGTACGTTTAATCGATGAATTGGTGCG
AGTAACTCCGCCAACCATGTATTTGACTAAATTTACACGTACAGGAGATAAGTTCACGATTGAAGGTAAAGCTGAAAGTC
CAAACACAGTAGCTGAGTTACTGAGAAATCTTGAAGCATCACCTTGGTATCGCAACGCTTTTATGAATTCCTTTTTAGCG
GCTGAAGAGAAAAAAGACAAAACTGTCAGCTCGCTTATACCTCGTATTGAAGAAAACTATGGAAGTTTTGTTGTAACTGT
TGATCTTGGTGAAATAGGCACAACAGTTGAAGCTGACCCATTAGCAGAAACGGTCGCATCAGGAACAGTGGGGGCAGCAC
AATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAACAATTTATTGCATATTGTGTAGG
GGTTGCTGCATTAGGTGTGGCATCGGTTTTGGCAGGATGGGGTTATCTTGATTACAAATTAAATGATCAAGAACAAGCGA
ACCAACTGATTGTGAGCACAAATCAAAATCTTGATGCACAATTAAAATCCTTAGATGGCTTGCAAGAGCGACGTAATGCA
ATTATTGAACGGATGAAACTCATTCAAGGTTTGCAAGGTCAAAGACCTGTTGCTGTACGTTTAATCGATGAATTGGTGCG
AGTAACTCCGCCAACCATGTATTTGACTAAATTTACACGTACAGGAGATAAGTTCACGATTGAAGGTAAAGCTGAAAGTC
CAAACACAGTAGCTGAGTTACTGAGAAATCTTGAAGCATCACCTTGGTATCGCAACGCTTTTATGAATTCCTTTTTAGCG
GCTGAAGAGAAAAAAGACAAAACTGTCAGCTCGCTTATACCTCGTATTGAAGAAAACTATGGAAGTTTTGTTGTAACTGT
TGATCTTGGTGAAATAGGCACAACAGTTGAAGCTGACCCATTAGCAGAAACGGTCGCATCAGGAACAGTGGGGGCAGCAC
AATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
76.636 |
100 |
0.766 |
| comN | Acinetobacter baylyi ADP1 |
73.333 |
98.131 |
0.72 |