Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DKY66_RS01105 Genome accession   NZ_CP029561
Coordinates   152344..152526 (+) Length   60 a.a.
NCBI ID   WP_000965649.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain 32790-3A     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 147344..157526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKY66_RS01060 (DKY66_01060) - 147507..147833 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  DKY66_RS01065 (DKY66_01065) - 147808..148020 (+) 213 WP_000698337.1 hypothetical protein -
  DKY66_RS01070 (DKY66_01070) - 148033..148335 (+) 303 WP_000215499.1 hypothetical protein -
  DKY66_RS01075 (DKY66_01075) - 148337..148591 (+) 255 WP_000611524.1 phage holin -
  DKY66_RS01080 (DKY66_01080) - 148717..150051 (+) 1335 WP_000257234.1 GH25 family lysozyme -
  DKY66_RS01085 (DKY66_01085) - 150216..151112 (+) 897 WP_001061853.1 sensor histidine kinase -
  DKY66_RS01090 (DKY66_01090) - 151106..151405 (+) 300 WP_000258211.1 STAS-like domain-containing protein -
  DKY66_RS01095 (DKY66_01095) - 151515..151715 (+) 201 WP_000076712.1 CsbD family protein -
  DKY66_RS01100 (DKY66_01100) - 151756..151926 (-) 171 WP_000356856.1 hypothetical protein -
  DKY66_RS01105 (DKY66_01105) prx 152344..152526 (+) 183 WP_000965649.1 hypothetical protein Regulator
  DKY66_RS01110 (DKY66_01110) - 152739..153431 (+) 693 WP_000049277.1 histidine phosphatase family protein -
  DKY66_RS01115 (DKY66_01115) - 153428..154180 (+) 753 WP_000739666.1 M15 family metallopeptidase -
  DKY66_RS01120 (DKY66_01120) - 154177..154752 (+) 576 WP_001231504.1 glycoside hydrolase family 73 protein -
  DKY66_RS01125 (DKY66_01125) hrcA 154895..155929 (+) 1035 WP_001873813.1 heat-inducible transcriptional repressor HrcA -
  DKY66_RS01130 (DKY66_01130) grpE 155932..156504 (+) 573 WP_001869793.1 nucleotide exchange factor GrpE -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7024.13 Da        Isoelectric Point: 4.1954

>NTDB_id=254255 DKY66_RS01105 WP_000965649.1 152344..152526(+) (prx) [Streptococcus agalactiae strain 32790-3A]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=254255 DKY66_RS01105 WP_000965649.1 152344..152526(+) (prx) [Streptococcus agalactiae strain 32790-3A]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS8232

65

100

0.65

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5

  prx Streptococcus pyogenes MGAS315

70.732

68.333

0.483


Multiple sequence alignment