Detailed information NTG0254046

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DKG71_RS39590
• Genome accession: NZ_CP029541
• Coordinates: 9084630..9085265 (-)
• Length: 211 a.a.
• NCBI ID: WP_109895141.1
• Uniprot ID: -
• Organism: Streptomyces sp. NEAU-S7GS2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 9079630..9090265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG71_RS39565 (DKG71_39565)	-	9081116..9081544 (+)	429	WP_109895135.1	ATP-binding protein	-
DKG71_RS39570 (DKG71_39570)	-	9081573..9082490 (-)	918	WP_093646650.1	LysR family transcriptional regulator	-
DKG71_RS39575 (DKG71_39575)	-	9082562..9083221 (+)	660	WP_109895137.1	LysE family transporter	-
DKG71_RS39580 (DKG71_39580)	-	9083360..9083833 (-)	474	WP_026170151.1	NlpC/P60 family protein	-
DKG71_RS39585 (DKG71_39585)	-	9084315..9084623 (-)	309	WP_109895139.1	hypothetical protein	-
DKG71_RS39590 (DKG71_39590)	clpP	9084630..9085265 (-)	636	WP_109895141.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DKG71_RS39595 (DKG71_39595)	-	9085321..9085635 (+)	315	WP_018092580.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
DKG71_RS39600 (DKG71_39600)	-	9085675..9086619 (-)	945	WP_018092581.1	M28 family metallopeptidase	-
DKG71_RS39605 (DKG71_39605)	-	9087141..9087443 (+)	303	WP_026170153.1	urease subunit gamma	-
DKG71_RS39610 (DKG71_39610)	-	9087460..9087771 (+)	312	WP_093646657.1	urease subunit beta	-
DKG71_RS39615 (DKG71_39615)	-	9087764..9089485 (+)	1722	WP_109895143.1	urease subunit alpha	-
DKG71_RS39620 (DKG71_39620)	-	9089528..9090202 (+)	675	WP_109895145.1	urease accessory UreF family protein	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 23274.51 Da
• Isoelectric Point: 5.9314

>NTDB_id=254046 DKG71_RS39590 WP_109895141.1 9084630..9085265(-) (clpP) [Streptomyces sp. NEAU-S7GS2]
MLRPMARYVLPEFTERTSQGTRTMDPYSKLLSERIIFLGTPVDDASANDVMAQFIHLEHASPDQDISLYINSPGGSFTAM
TAIYDTMRFVSCDVQTICLGQAASAAAVLLAAGTPGKRLALPGARILIHQPSITEPIQGQATDLQIQAEELLRTRDTLER
MLAEHTGQTRERIAVDIERDKIFDARAAQEYGLIDGLTHQRKQSVPHIGAR

Nucleotide

• Length: 636 bp

>NTDB_id=254046 DKG71_RS39590 WP_109895141.1 9084630..9085265(-) (clpP) [Streptomyces sp. NEAU-S7GS2]
ATGCTGCGACCAATGGCCCGCTATGTCCTTCCGGAGTTCACCGAGCGCACGTCCCAGGGGACGCGCACCATGGACCCGTA
CTCGAAGCTGCTCAGCGAACGCATCATCTTCCTGGGCACCCCGGTCGACGACGCCTCCGCCAACGACGTGATGGCGCAGT
TCATCCACCTCGAACACGCCTCGCCCGACCAGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCCTTCACGGCGATG
ACCGCCATCTACGACACGATGCGCTTCGTGTCGTGCGACGTGCAGACCATCTGCCTGGGGCAGGCCGCCTCCGCCGCCGC
GGTACTGCTGGCCGCCGGCACCCCCGGAAAGCGGCTGGCGCTGCCCGGCGCCCGGATCCTGATCCACCAGCCCTCGATCA
CCGAGCCCATCCAGGGCCAGGCCACCGATCTGCAGATCCAGGCGGAGGAGCTGCTGCGCACCCGCGACACGCTGGAGCGG
ATGCTGGCGGAGCACACCGGACAGACGCGTGAGCGGATCGCCGTCGATATCGAGCGCGACAAGATCTTCGACGCCCGAGC
CGCCCAGGAGTACGGCCTGATCGACGGGCTCACCCATCAGCGCAAGCAGTCCGTCCCCCACATCGGCGCACGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (19-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	51.562	90.995	0.469
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.691	90.521	0.441
clpP	Streptococcus pneumoniae Rx1	48.128	88.626	0.427
clpP	Streptococcus pneumoniae D39	48.128	88.626	0.427
clpP	Streptococcus pneumoniae R6	48.128	88.626	0.427
clpP	Streptococcus pneumoniae TIGR4	48.128	88.626	0.427
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	46.809	89.1	0.417
clpP	Lactococcus lactis subsp. cremoris KW2	46.809	89.1	0.417
clpP	Streptococcus pyogenes MGAS315	47.059	88.626	0.417
clpP	Streptococcus pyogenes JRS4	47.059	88.626	0.417
clpP	Streptococcus thermophilus LMG 18311	46.524	88.626	0.412
clpP	Streptococcus thermophilus LMD-9	46.524	88.626	0.412
clpP	Streptococcus mutans UA159	44.845	91.943	0.412