Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG474_RS10760 | Genome accession | NZ_CP024120 |
| Coordinates | 2063028..2063609 (-) | Length | 193 a.a. |
| NCBI ID | WP_041809745.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2058028..2068609
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG474_RS10735 (CG474_010655) | - | 2058344..2059186 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG474_RS10740 (CG474_010660) | - | 2059340..2059636 (-) | 297 | WP_048723025.1 | ArsR/SmtB family transcription factor | - |
| CG474_RS10745 (CG474_010665) | - | 2059902..2060741 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG474_RS10750 (CG474_010670) | - | 2060734..2061939 (-) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG474_RS10755 (CG474_010675) | - | 2062116..2062973 (+) | 858 | WP_012094389.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG474_RS10760 (CG474_010680) | clpP | 2063028..2063609 (-) | 582 | WP_041809745.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG474_RS10765 (CG474_010685) | - | 2063631..2064314 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG474_RS10770 (CG474_010690) | - | 2064461..2064781 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG474_RS23785 (CG474_010695) | rpiA | 2064798..2065466 (+) | 669 | Protein_2015 | ribose 5-phosphate isomerase A | - |
| CG474_RS10780 (CG474_010700) | - | 2065654..2066091 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG474_RS10785 (CG474_010705) | - | 2066349..2066696 (-) | 348 | Protein_2017 | GNAT family N-acetyltransferase | - |
| CG474_RS10790 (CG474_010710) | - | 2066831..2067154 (-) | 324 | WP_041810383.1 | DUF952 domain-containing protein | - |
| CG474_RS10795 (CG474_010715) | - | 2067192..2067539 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG474_RS10800 (CG474_010720) | - | 2067693..2068394 (-) | 702 | WP_048723031.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21202.48 Da Isoelectric Point: 5.0724
>NTDB_id=252253 CG474_RS10760 WP_041809745.1 2063028..2063609(-) (clpP) [Bacillus cytotoxicus strain CH_1]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=252253 CG474_RS10760 WP_041809745.1 2063028..2063609(-) (clpP) [Bacillus cytotoxicus strain CH_1]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCTCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCCGATCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCTCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCCGATCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus thermophilus LMD-9 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pneumoniae R6 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae D39 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae Rx1 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pyogenes MGAS315 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus pyogenes JRS4 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |