Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG476_RS10890 | Genome accession | NZ_CP024116 |
| Coordinates | 2125989..2126570 (-) | Length | 193 a.a. |
| NCBI ID | WP_094374228.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2120989..2131570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG476_RS10865 (CG476_010840) | - | 2121305..2122147 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG476_RS10870 (CG476_010845) | - | 2122301..2122597 (-) | 297 | WP_012094386.1 | ArsR/SmtB family transcription factor | - |
| CG476_RS10875 (CG476_010850) | - | 2122863..2123702 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG476_RS10880 (CG476_010855) | - | 2123695..2124900 (-) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG476_RS10885 (CG476_010860) | - | 2125077..2125934 (+) | 858 | WP_087094974.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG476_RS10890 (CG476_010865) | clpP | 2125989..2126570 (-) | 582 | WP_094374228.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG476_RS10895 (CG476_010870) | - | 2126592..2127275 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG476_RS10900 (CG476_010875) | - | 2127422..2127742 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG476_RS24305 (CG476_010880) | rpiA | 2127759..2128423 (+) | 665 | Protein_2049 | ribose 5-phosphate isomerase A | - |
| CG476_RS10910 (CG476_010885) | - | 2128611..2129048 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG476_RS10915 (CG476_010890) | - | 2129246..2129594 (-) | 349 | Protein_2051 | GNAT family N-acetyltransferase | - |
| CG476_RS10920 (CG476_010895) | - | 2129729..2130052 (-) | 324 | WP_087094992.1 | DUF952 domain-containing protein | - |
| CG476_RS10925 (CG476_010900) | - | 2130090..2130437 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG476_RS10930 (CG476_010905) | - | 2130591..2131292 (-) | 702 | WP_087094976.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21185.45 Da Isoelectric Point: 5.0724
>NTDB_id=252205 CG476_RS10890 WP_094374228.1 2125989..2126570(-) (clpP) [Bacillus cytotoxicus strain CH_2]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=252205 CG476_RS10890 WP_094374228.1 2125989..2126570(-) (clpP) [Bacillus cytotoxicus strain CH_2]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
66.492 |
98.964 |
0.658 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
66.138 |
97.927 |
0.648 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pyogenes JRS4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae D39 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae R6 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae TIGR4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae Rx1 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus mutans UA159 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.852 |
97.927 |
0.508 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |