Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG478_RS04365 | Genome accession | NZ_CP024111 |
| Coordinates | 805522..806103 (+) | Length | 193 a.a. |
| NCBI ID | WP_094374228.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 800522..811103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG478_RS04325 (CG478_004335) | - | 800800..801501 (+) | 702 | WP_087094976.1 | alpha/beta hydrolase | - |
| CG478_RS04330 (CG478_004340) | - | 801655..802002 (+) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG478_RS04335 (CG478_004345) | - | 802040..802363 (+) | 324 | WP_087094992.1 | DUF952 domain-containing protein | - |
| CG478_RS04340 (CG478_004350) | - | 802498..802846 (+) | 349 | Protein_798 | GNAT family N-acetyltransferase | - |
| CG478_RS04345 (CG478_004355) | - | 803044..803481 (-) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG478_RS23670 (CG478_004360) | rpiA | 803669..804333 (-) | 665 | Protein_800 | ribose 5-phosphate isomerase A | - |
| CG478_RS04355 (CG478_004365) | - | 804350..804670 (-) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG478_RS04360 (CG478_004370) | - | 804817..805500 (+) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG478_RS04365 (CG478_004375) | clpP | 805522..806103 (+) | 582 | WP_094374228.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG478_RS04370 (CG478_004380) | - | 806158..807015 (-) | 858 | WP_087094974.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG478_RS04375 (CG478_004385) | - | 807192..808397 (+) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG478_RS04380 (CG478_004390) | - | 808390..809229 (+) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG478_RS04385 (CG478_004395) | - | 809495..809791 (+) | 297 | WP_012094386.1 | ArsR/SmtB family transcription factor | - |
| CG478_RS04390 (CG478_004400) | - | 809945..810787 (-) | 843 | WP_012094385.1 | oxidoreductase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21185.45 Da Isoelectric Point: 5.0724
>NTDB_id=252094 CG478_RS04365 WP_094374228.1 805522..806103(+) (clpP) [Bacillus cytotoxicus strain CH_4]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=252094 CG478_RS04365 WP_094374228.1 805522..806103(+) (clpP) [Bacillus cytotoxicus strain CH_4]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
66.492 |
98.964 |
0.658 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
66.138 |
97.927 |
0.648 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pyogenes JRS4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae D39 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae R6 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae TIGR4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae Rx1 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus mutans UA159 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.852 |
97.927 |
0.508 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |