Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG479_RS19685 | Genome accession | NZ_CP024109 |
| Coordinates | 3746227..3746808 (+) | Length | 193 a.a. |
| NCBI ID | WP_048723478.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_13 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3741227..3751808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG479_RS19650 (CG479_019615) | - | 3742216..3742422 (+) | 207 | WP_012096140.1 | DUF1657 domain-containing protein | - |
| CG479_RS19655 (CG479_019620) | - | 3742513..3743001 (+) | 489 | WP_012096141.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| CG479_RS19660 (CG479_019625) | spoVAC | 3743036..3743512 (+) | 477 | WP_012096142.1 | stage V sporulation protein AC | - |
| CG479_RS19665 (CG479_019630) | spoVAD | 3743513..3744529 (+) | 1017 | WP_012096143.1 | stage V sporulation protein AD | - |
| CG479_RS19670 (CG479_019635) | spoVAE | 3744526..3744876 (+) | 351 | WP_012096144.1 | stage V sporulation protein AE | - |
| CG479_RS19675 (CG479_019640) | - | 3744888..3745094 (+) | 207 | WP_012096145.1 | DUF1657 domain-containing protein | - |
| CG479_RS19680 (CG479_019645) | - | 3745115..3745984 (+) | 870 | WP_094396575.1 | DUF421 domain-containing protein | - |
| CG479_RS19685 (CG479_019650) | clpP | 3746227..3746808 (+) | 582 | WP_048723478.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG479_RS19695 (CG479_019655) | - | 3747200..3747457 (-) | 258 | WP_048723480.1 | HPr family phosphocarrier protein | - |
| CG479_RS19700 (CG479_019660) | whiA | 3747479..3748429 (-) | 951 | WP_012096150.1 | DNA-binding protein WhiA | - |
| CG479_RS19705 (CG479_019665) | - | 3748517..3749470 (-) | 954 | WP_012096151.1 | gluconeogenesis factor YvcK family protein | - |
| CG479_RS19710 (CG479_019670) | rapZ | 3749474..3750355 (-) | 882 | WP_012096152.1 | RNase adapter RapZ | - |
| CG479_RS19715 (CG479_019675) | - | 3750376..3750834 (-) | 459 | WP_012096153.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21390.67 Da Isoelectric Point: 5.0645
>NTDB_id=252081 CG479_RS19685 WP_048723478.1 3746227..3746808(+) (clpP) [Bacillus cytotoxicus strain CH_13]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=252081 CG479_RS19685 WP_048723478.1 3746227..3746808(+) (clpP) [Bacillus cytotoxicus strain CH_13]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
92.708 |
99.482 |
0.922 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
97.409 |
0.668 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus pneumoniae TIGR4 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae D39 |
59.375 |
99.482 |
0.591 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae Rx1 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae R6 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pyogenes JRS4 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pyogenes MGAS315 |
57.812 |
99.482 |
0.575 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus mutans UA159 |
56.995 |
100 |
0.57 |