Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG479_RS10400 | Genome accession | NZ_CP024109 |
| Coordinates | 2016580..2017161 (-) | Length | 193 a.a. |
| NCBI ID | WP_041809745.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_13 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2011580..2022161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG479_RS10375 (CG479_010320) | - | 2011896..2012738 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG479_RS10380 (CG479_010325) | - | 2012892..2013188 (-) | 297 | WP_012094386.1 | ArsR/SmtB family transcription factor | - |
| CG479_RS10385 (CG479_010330) | - | 2013454..2014293 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG479_RS10390 (CG479_010335) | - | 2014286..2015491 (-) | 1206 | WP_012094388.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG479_RS10395 (CG479_010340) | - | 2015668..2016525 (+) | 858 | WP_012094389.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG479_RS10400 (CG479_010345) | clpP | 2016580..2017161 (-) | 582 | WP_041809745.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG479_RS10405 (CG479_010350) | - | 2017183..2017866 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG479_RS10410 (CG479_010355) | - | 2018013..2018333 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG479_RS22930 (CG479_010360) | rpiA | 2018350..2019014 (+) | 665 | Protein_1955 | ribose 5-phosphate isomerase A | - |
| CG479_RS10420 (CG479_010365) | - | 2019202..2019639 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG479_RS10425 (CG479_010370) | - | 2019897..2020244 (-) | 348 | Protein_1957 | GNAT family N-acetyltransferase | - |
| CG479_RS10430 (CG479_010375) | - | 2020379..2020702 (-) | 324 | WP_041810383.1 | DUF952 domain-containing protein | - |
| CG479_RS10435 (CG479_010380) | - | 2020739..2021086 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG479_RS10440 (CG479_010385) | - | 2021240..2021941 (-) | 702 | WP_012094396.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21202.48 Da Isoelectric Point: 5.0724
>NTDB_id=252063 CG479_RS10400 WP_041809745.1 2016580..2017161(-) (clpP) [Bacillus cytotoxicus strain CH_13]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=252063 CG479_RS10400 WP_041809745.1 2016580..2017161(-) (clpP) [Bacillus cytotoxicus strain CH_13]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAACTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCTGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAACTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCTGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus thermophilus LMD-9 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pneumoniae R6 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae D39 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae Rx1 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pyogenes MGAS315 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus pyogenes JRS4 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |