Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG481_RS10705 | Genome accession | NZ_CP024104 |
| Coordinates | 2063204..2063785 (-) | Length | 193 a.a. |
| NCBI ID | WP_041809745.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_23 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2058204..2068785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG481_RS10680 (CG481_010595) | - | 2058520..2059362 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG481_RS10685 (CG481_010600) | - | 2059516..2059812 (-) | 297 | WP_048723025.1 | ArsR/SmtB family transcription factor | - |
| CG481_RS10690 (CG481_010605) | - | 2060078..2060917 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG481_RS10695 (CG481_010610) | - | 2060910..2062115 (-) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG481_RS10700 (CG481_010615) | - | 2062292..2063149 (+) | 858 | WP_012094389.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG481_RS10705 (CG481_010620) | clpP | 2063204..2063785 (-) | 582 | WP_041809745.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG481_RS10710 (CG481_010625) | - | 2063807..2064490 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG481_RS10715 (CG481_010630) | - | 2064637..2064957 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG481_RS24055 (CG481_010635) | rpiA | 2064974..2065642 (+) | 669 | Protein_2014 | ribose 5-phosphate isomerase A | - |
| CG481_RS10725 (CG481_010640) | - | 2065830..2066267 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG481_RS10730 (CG481_010645) | - | 2066525..2066872 (-) | 348 | Protein_2016 | GNAT family N-acetyltransferase | - |
| CG481_RS10735 (CG481_010650) | - | 2067007..2067330 (-) | 324 | WP_041810383.1 | DUF952 domain-containing protein | - |
| CG481_RS10740 (CG481_010655) | - | 2067368..2067715 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG481_RS10745 (CG481_010660) | - | 2067869..2068570 (-) | 702 | WP_048723031.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21202.48 Da Isoelectric Point: 5.0724
>NTDB_id=251967 CG481_RS10705 WP_041809745.1 2063204..2063785(-) (clpP) [Bacillus cytotoxicus strain CH_23]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=251967 CG481_RS10705 WP_041809745.1 2063204..2063785(-) (clpP) [Bacillus cytotoxicus strain CH_23]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCTCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCCGATCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCTCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCCGATCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus thermophilus LMD-9 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pneumoniae R6 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae D39 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae Rx1 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pyogenes MGAS315 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus pyogenes JRS4 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |