Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG482_RS20545 | Genome accession | NZ_CP024101 |
| Coordinates | 3890313..3890894 (+) | Length | 193 a.a. |
| NCBI ID | WP_048723478.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_25 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3885313..3895894
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG482_RS20510 (CG482_020430) | - | 3886302..3886508 (+) | 207 | WP_012096140.1 | DUF1657 domain-containing protein | - |
| CG482_RS20515 (CG482_020435) | - | 3886599..3887087 (+) | 489 | WP_048723473.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| CG482_RS20520 (CG482_020440) | spoVAC | 3887122..3887598 (+) | 477 | WP_012096142.1 | stage V sporulation protein AC | - |
| CG482_RS20525 (CG482_020445) | spoVAD | 3887599..3888615 (+) | 1017 | WP_048723474.1 | stage V sporulation protein AD | - |
| CG482_RS20530 (CG482_020450) | spoVAE | 3888612..3888962 (+) | 351 | WP_012096144.1 | stage V sporulation protein AE | - |
| CG482_RS20535 (CG482_020455) | - | 3888974..3889180 (+) | 207 | WP_012096145.1 | DUF1657 domain-containing protein | - |
| CG482_RS20540 (CG482_020460) | - | 3889201..3890070 (+) | 870 | WP_048723476.1 | DUF421 domain-containing protein | - |
| CG482_RS20545 (CG482_020465) | clpP | 3890313..3890894 (+) | 582 | WP_048723478.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG482_RS20555 (CG482_020470) | - | 3891286..3891543 (-) | 258 | WP_048723480.1 | HPr family phosphocarrier protein | - |
| CG482_RS20560 (CG482_020475) | whiA | 3891565..3892515 (-) | 951 | WP_012096150.1 | DNA-binding protein WhiA | - |
| CG482_RS20565 (CG482_020480) | - | 3892603..3893556 (-) | 954 | WP_012096151.1 | gluconeogenesis factor YvcK family protein | - |
| CG482_RS20570 (CG482_020485) | rapZ | 3893560..3894441 (-) | 882 | WP_012096152.1 | RNase adapter RapZ | - |
| CG482_RS20575 (CG482_020490) | - | 3894462..3894920 (-) | 459 | WP_012096153.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21390.67 Da Isoelectric Point: 5.0645
>NTDB_id=251937 CG482_RS20545 WP_048723478.1 3890313..3890894(+) (clpP) [Bacillus cytotoxicus strain CH_25]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=251937 CG482_RS20545 WP_048723478.1 3890313..3890894(+) (clpP) [Bacillus cytotoxicus strain CH_25]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
92.708 |
99.482 |
0.922 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
97.409 |
0.668 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus pneumoniae TIGR4 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae D39 |
59.375 |
99.482 |
0.591 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae Rx1 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae R6 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pyogenes JRS4 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pyogenes MGAS315 |
57.812 |
99.482 |
0.575 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus mutans UA159 |
56.995 |
100 |
0.57 |