Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG483_RS10910 | Genome accession | NZ_CP024098 |
| Coordinates | 2126098..2126679 (-) | Length | 193 a.a. |
| NCBI ID | WP_094374228.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_38 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2121098..2131679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG483_RS10885 (CG483_010855) | - | 2121414..2122256 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG483_RS10890 (CG483_010860) | - | 2122410..2122706 (-) | 297 | WP_012094386.1 | ArsR/SmtB family transcription factor | - |
| CG483_RS10895 (CG483_010865) | - | 2122972..2123811 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG483_RS10900 (CG483_010870) | - | 2123804..2125009 (-) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG483_RS10905 (CG483_010875) | - | 2125186..2126043 (+) | 858 | WP_087094974.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG483_RS10910 (CG483_010880) | clpP | 2126098..2126679 (-) | 582 | WP_094374228.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG483_RS10915 (CG483_010885) | - | 2126701..2127384 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG483_RS10920 (CG483_010890) | - | 2127531..2127851 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG483_RS24000 (CG483_010895) | rpiA | 2127868..2128532 (+) | 665 | Protein_2052 | ribose 5-phosphate isomerase A | - |
| CG483_RS10930 (CG483_010900) | - | 2128720..2129157 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG483_RS10935 (CG483_010905) | - | 2129355..2129703 (-) | 349 | Protein_2054 | GNAT family N-acetyltransferase | - |
| CG483_RS10940 (CG483_010910) | - | 2129838..2130161 (-) | 324 | WP_087094992.1 | DUF952 domain-containing protein | - |
| CG483_RS10945 (CG483_010915) | - | 2130199..2130546 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG483_RS10950 (CG483_010920) | - | 2130700..2131401 (-) | 702 | WP_087094976.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21185.45 Da Isoelectric Point: 5.0724
>NTDB_id=251870 CG483_RS10910 WP_094374228.1 2126098..2126679(-) (clpP) [Bacillus cytotoxicus strain CH_38]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=251870 CG483_RS10910 WP_094374228.1 2126098..2126679(-) (clpP) [Bacillus cytotoxicus strain CH_38]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
66.492 |
98.964 |
0.658 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
66.138 |
97.927 |
0.648 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pyogenes JRS4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae D39 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae R6 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae TIGR4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae Rx1 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus mutans UA159 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.852 |
97.927 |
0.508 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |