Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CG475_RS10905 | Genome accession | NZ_CP024096 |
| Coordinates | 2126155..2126736 (-) | Length | 193 a.a. |
| NCBI ID | WP_094374228.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain CH_39 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2121155..2131736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG475_RS10880 (CG475_010845) | - | 2121471..2122313 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| CG475_RS10885 (CG475_010850) | - | 2122467..2122763 (-) | 297 | WP_012094386.1 | ArsR/SmtB family transcription factor | - |
| CG475_RS10890 (CG475_010855) | - | 2123029..2123868 (-) | 840 | WP_012094387.1 | ABC transporter permease | - |
| CG475_RS10895 (CG475_010860) | - | 2123861..2125066 (-) | 1206 | WP_048723028.1 | quaternary amine ABC transporter ATP-binding protein | - |
| CG475_RS10900 (CG475_010865) | - | 2125243..2126100 (+) | 858 | WP_087094974.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CG475_RS10905 (CG475_010870) | clpP | 2126155..2126736 (-) | 582 | WP_094374228.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CG475_RS10910 (CG475_010875) | - | 2126758..2127441 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| CG475_RS10915 (CG475_010880) | - | 2127588..2127908 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CG475_RS23990 (CG475_010885) | rpiA | 2127925..2128589 (+) | 665 | Protein_2052 | ribose 5-phosphate isomerase A | - |
| CG475_RS10925 (CG475_010890) | - | 2128777..2129214 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| CG475_RS10930 (CG475_010895) | - | 2129412..2129760 (-) | 349 | Protein_2054 | GNAT family N-acetyltransferase | - |
| CG475_RS10935 (CG475_010900) | - | 2129895..2130218 (-) | 324 | WP_087094992.1 | DUF952 domain-containing protein | - |
| CG475_RS10940 (CG475_010905) | - | 2130256..2130603 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| CG475_RS10945 (CG475_010910) | - | 2130757..2131458 (-) | 702 | WP_087094976.1 | alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21185.45 Da Isoelectric Point: 5.0724
>NTDB_id=251823 CG475_RS10905 WP_094374228.1 2126155..2126736(-) (clpP) [Bacillus cytotoxicus strain CH_39]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASNVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRIVKLKQDINNIISDRTGQ
PIEKVARDTERDYFMAAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=251823 CG475_RS10905 WP_094374228.1 2126155..2126736(-) (clpP) [Bacillus cytotoxicus strain CH_39]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAATGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAATTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATAGTAAAGTTAAAACAAGACATTAACAATATTATATCCGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGGCGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
66.492 |
98.964 |
0.658 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
66.138 |
97.927 |
0.648 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pyogenes JRS4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae D39 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae R6 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae TIGR4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pneumoniae Rx1 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus mutans UA159 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.852 |
97.927 |
0.508 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |