Detailed information NTG0251314

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CRN81_RS19875
• Genome accession: NZ_CP024028
• Coordinates: 4248708..4249787 (+)
• Length: 359 a.a.
• NCBI ID: WP_099427694.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain CV1192
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4243708..4254787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CRN81_RS19850 (CRN81_19845)	rsmB	4243832..4245082 (-)	1251	WP_076227373.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CRN81_RS19855 (CRN81_19850)	htpX	4245149..4246003 (-)	855	WP_011137809.1	zinc metalloprotease HtpX	-
CRN81_RS19860 (CRN81_19855)	fmt	4246046..4246969 (-)	924	WP_099427861.1	methionyl-tRNA formyltransferase	-
CRN81_RS19865 (CRN81_19860)	def	4247044..4247547 (-)	504	WP_011137811.1	peptide deformylase	-
CRN81_RS19870 (CRN81_19865)	-	4247674..4248711 (+)	1038	WP_081542148.1	LysM peptidoglycan-binding domain-containing protein	-
CRN81_RS19875 (CRN81_19870)	dprA	4248708..4249787 (+)	1080	WP_099427694.1	DNA-processing protein DprA	Machinery gene
CRN81_RS19880 (CRN81_19875)	-	4249817..4250275 (+)	459	WP_011137814.1	DUF494 family protein	-
CRN81_RS19885 (CRN81_19880)	topA	4250426..4252735 (+)	2310	WP_043618220.1	type I DNA topoisomerase	-
CRN81_RS20885	-	4252833..4254110 (-)	1278	WP_157760339.1	hypothetical protein	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 37068.49 Da
• Isoelectric Point: 6.2323

>NTDB_id=251314 CRN81_RS19875 WP_099427694.1 4248708..4249787(+) (dprA) [Chromobacterium violaceum strain CV1192]
MSGAPQAWLTLALTPGIGPVGFLKLIDAFGSAEAAAAARSAQTEKLVGREAAEALQAGAAAESVQAALAWAESDGCHLIT
LLDADYPAQLAEAASPPPLLFARGRRELLARTMLAVVGSRAATQQGKRNAEDFASALAAHGYTIVSGLASGIDAAAHQGA
LAHPASTVAVIGTGIDRVYPASNRQLAHRVAEHGLILSEFPLGMGPLPGHFPRRNRIIAGLARGCLVVEAGIASGSLISA
RLAMENNRDVMAIPGSIHNAQARGCHRLIKDGARLVESVDDVLDEIGRLPAAPPALPREQEPEAPPLLSSMGWEPVLADA
LAGTLGLTPGEVYAMLLELELAGRVASLPGGRFQRLAQL

Nucleotide

• Length: 1080 bp

>NTDB_id=251314 CRN81_RS19875 WP_099427694.1 4248708..4249787(+) (dprA) [Chromobacterium violaceum strain CV1192]
ATGAGCGGCGCCCCGCAAGCCTGGCTGACGCTGGCGCTGACCCCCGGCATCGGCCCGGTCGGCTTCCTGAAGCTGATAGA
CGCGTTCGGCTCGGCCGAGGCCGCGGCCGCCGCCCGTTCCGCCCAGACCGAGAAGCTGGTGGGCCGCGAGGCGGCCGAAG
CGCTGCAGGCCGGCGCGGCGGCGGAATCGGTCCAGGCCGCGCTCGCCTGGGCCGAAAGCGACGGCTGCCACTTGATCACG
CTGCTCGACGCCGACTACCCGGCGCAGCTGGCCGAAGCCGCGTCGCCGCCGCCGCTGCTGTTCGCGCGCGGCCGGCGCGA
GCTGCTGGCGCGGACCATGCTGGCCGTGGTCGGCAGCCGGGCCGCCACCCAGCAGGGCAAGCGCAACGCCGAGGACTTCG
CGTCGGCGCTGGCCGCCCACGGCTACACCATCGTCAGCGGCCTGGCCAGCGGCATCGACGCCGCCGCCCACCAAGGCGCG
CTCGCGCATCCGGCCTCCACCGTCGCGGTGATCGGCACCGGCATCGACCGCGTCTACCCGGCGTCCAACCGCCAGCTCGC
CCACCGCGTCGCCGAGCACGGGCTGATCCTGTCCGAGTTCCCGCTGGGCATGGGCCCGCTGCCCGGCCACTTCCCGCGCC
GCAACCGGATCATCGCCGGCCTGGCCCGCGGCTGCCTGGTGGTGGAGGCCGGCATCGCGTCCGGCTCGCTGATCAGCGCG
CGGCTGGCGATGGAGAACAACCGCGACGTGATGGCGATACCGGGCAGCATCCACAACGCCCAGGCGCGCGGCTGCCACCG
GCTGATCAAGGATGGCGCGCGGCTGGTGGAGAGCGTCGACGACGTGCTGGACGAGATCGGCCGGCTGCCGGCCGCCCCGC
CGGCCCTTCCCCGCGAACAGGAGCCGGAGGCGCCGCCGCTGCTGAGCAGCATGGGCTGGGAGCCGGTGCTGGCGGACGCG
CTGGCCGGGACGCTCGGGTTGACTCCCGGGGAGGTTTACGCGATGCTGCTCGAACTGGAACTGGCCGGCCGCGTGGCCAG
CCTGCCGGGCGGCCGCTTCCAGCGGCTCGCACAACTCTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (291-351)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis MC58	46.41	100	0.504
dprA	Neisseria meningitidis strain C311	46.41	100	0.504
dprA	Neisseria gonorrhoeae MS11	46.649	100	0.504
dprA	Neisseria gonorrhoeae strain FA1090	46.392	100	0.501
dprA	Vibrio campbellii strain DS40M4	41.551	100	0.418
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.833	100	0.398
dprA	Legionella pneumophila strain ERS1305867	46.309	83.008	0.384
dprA	Vibrio cholerae strain A1552	36.986	100	0.376
dprA	Acinetobacter baylyi ADP1	35.989	100	0.365