Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DB248_RS06500 Genome accession   NZ_CP028841
Coordinates   1223646..1223828 (-) Length   60 a.a.
NCBI ID   WP_029714291.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain CCUG 4207     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1218646..1228828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DB248_RS06485 (DB248_06490) - 1219084..1219779 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DB248_RS06490 (DB248_06495) - 1220018..1220953 (+) 936 WP_010922443.1 dihydroorotate oxidase -
  DB248_RS06495 (DB248_06500) - 1221253..1223115 (-) 1863 WP_029714293.1 heavy metal translocating P-type ATPase -
  DB248_RS06500 (DB248_06505) prx 1223646..1223828 (-) 183 WP_029714291.1 hypothetical protein Regulator
  DB248_RS06505 (DB248_06510) sda3 1224057..1224857 (+) 801 WP_011285611.1 streptodornase Sda3 -
  DB248_RS06510 (DB248_06515) - 1225128..1225562 (+) 435 WP_011017966.1 hypothetical protein -
  DB248_RS06515 (DB248_06520) - 1225632..1226837 (-) 1206 WP_010922446.1 glucosaminidase domain-containing protein -
  DB248_RS06520 (DB248_06525) - 1226953..1227180 (-) 228 WP_003058873.1 phage holin -
  DB248_RS06525 (DB248_06530) - 1227177..1227452 (-) 276 WP_002987582.1 hypothetical protein -
  DB248_RS06530 (DB248_06535) - 1227462..1228079 (-) 618 WP_010922447.1 DUF1366 domain-containing protein -
  DB248_RS06535 (DB248_06540) - 1228082..1228513 (-) 432 WP_010922448.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6974.02 Da        Isoelectric Point: 4.7361

>NTDB_id=248591 DB248_RS06500 WP_029714291.1 1223646..1223828(-) (prx) [Streptococcus pyogenes strain CCUG 4207]
MLTYDEFKQAIDRGYITGDTVMIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=248591 DB248_RS06500 WP_029714291.1 1223646..1223828(-) (prx) [Streptococcus pyogenes strain CCUG 4207]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

95

100

0.95
  prx Streptococcus pyogenes MGAS315

90

100

0.9
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

86.047

71.667

0.617
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533