Detailed information NTG0247947

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: CO687_RS03330
• Genome accession: NZ_CP023511
• Coordinates: 675860..677218 (+)
• Length: 452 a.a.
• NCBI ID: WP_096754926.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain FDAARGOS_371
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 670860..682218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO687_RS03315 (CO687_03315)	-	671683..672405 (+)	723	WP_061596031.1	ABC transporter ATP-binding protein	-
CO687_RS03320 (CO687_03320)	rpsD	672674..673285 (+)	612	WP_008810013.1	30S ribosomal protein S4	-
CO687_RS03325 (CO687_03325)	comA	673697..675850 (+)	2154	WP_096754925.1	peptide cleavage/export ABC transporter ComA	Regulator
CO687_RS03330 (CO687_03330)	comB	675860..677218 (+)	1359	WP_096754926.1	competence pheromone export protein ComB	Regulator
CO687_RS03335 (CO687_03335)	lytF	677337..678986 (-)	1650	WP_096754927.1	GBS Bsp-like repeat-containing protein	Regulator
CO687_RS03340 (CO687_03340)	purD	679231..680490 (+)	1260	WP_096754928.1	phosphoribosylamine--glycine ligase	-
CO687_RS03345 (CO687_03345)	-	680550..681743 (+)	1194	WP_053794284.1	ATP-grasp domain-containing protein	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 49921.17 Da
• Isoelectric Point: 5.7978

>NTDB_id=247947 CO687_RS03330 WP_096754926.1 675860..677218(+) (comB) [Streptococcus gordonii strain FDAARGOS_371]
MNEQFLESAEFYQKRYHNFASCLIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLAENKE
VKKGDLLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSFKDYQNQVESMTSSVNQQN
ATIASQNAAASQSQAELGGVISDVDSKLNDHRNLKNAIQSGVGIDESHPLYSLYQSYRDQLSLAEDKATAQSQIVAQLDG
QISQLEATAATYRVQYAGAGAQQAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDG
LLHLNPEVQGSTLVAEGTALAQIYPKITSERKIKIVTYVSSKDVSTIKNGDKVRFITADDANKQMILTSQISSIDANATQ
TKQGNFFKVECEMAVSKDQAKKLRYGLEGKFVMVTGQKTYFSYYMEKFFNLG

Nucleotide

• Length: 1359 bp

>NTDB_id=247947 CO687_RS03330 WP_096754926.1 675860..677218(+) (comB) [Streptococcus gordonii strain FDAARGOS_371]
ATGAATGAACAATTTTTAGAAAGTGCAGAGTTTTATCAGAAACGTTATCATAATTTTGCTAGTTGTTTAATTGTGCCAAG
TCTTATTTTACTAGTATTTCTAGTTGGTTTTTCTATGCTGGCTAAAAAAGAAATTACGATTTCTAGCCGTGCTTCTGTAG
AAGCTAGCCGAGTGCTAGCTCAGATTCAGTCGACTAGTAACCAGCCTATCATTGCGAATCATTTGGCAGAAAACAAGGAG
GTCAAAAAAGGGGACCTGCTAATCCAGTATGCAGTAGAAGGAGAGGGGGCTCAGGAACAGAAGTTTTCCAGCCAACTTGA
CTTACTCAAAGATCAAAAGGGCAAACTAGAAACTTTGCGTTCCAGTTTAGAAAGTGGGCGTAATCAATTCACTGAGCCAG
ATAGTTATGGCTATGAACAAAGCTTTAAAGACTACCAGAATCAAGTAGAGAGTATGACTAGTTCTGTGAATCAGCAAAAT
GCTACGATTGCTTCCCAAAATGCAGCAGCCAGTCAGTCTCAGGCGGAACTTGGTGGTGTTATCAGCGATGTGGATAGCAA
GCTAAATGACCATCGAAACTTAAAAAATGCCATTCAAAGTGGGGTGGGTATAGATGAATCGCACCCTCTTTACTCCTTGT
ATCAGTCCTATCGTGATCAGTTGAGTTTGGCAGAGGATAAGGCAACAGCTCAAAGTCAGATTGTAGCTCAGTTAGATGGG
CAAATCTCTCAATTAGAAGCAACAGCTGCGACTTATCGTGTCCAATATGCTGGTGCAGGCGCCCAACAAGCCTATGCTAG
CAATTTATCCAGTCAGTTGGCTTCACTGAAAGCCCAGTATCTGGTCAAGGTAGGACAAGAATTGACCACTCTGACTCAGC
AAATCTTGGAAGCCGAGAGCAATCTTAAACTTCAAGAAACAGTCTCTAAGCGAGGTCAGATTTTGGCTGAAATGGATGGC
TTGCTTCACTTAAATCCAGAAGTACAAGGATCTACTCTGGTGGCAGAAGGAACTGCTTTGGCTCAGATTTACCCCAAAAT
CACTAGTGAAAGAAAAATCAAAATTGTCACATATGTTTCTTCCAAGGATGTATCTACTATTAAAAATGGAGACAAGGTGC
GCTTTATCACTGCTGATGACGCTAACAAACAAATGATTTTGACATCCCAAATTTCCAGTATTGACGCCAATGCTACTCAA
ACCAAACAAGGAAATTTCTTTAAAGTAGAATGTGAAATGGCTGTTAGTAAAGATCAAGCTAAGAAGCTCCGCTATGGCTT
GGAAGGTAAATTTGTCATGGTAACTGGGCAAAAGACTTATTTCAGCTATTATATGGAAAAATTTTTTAATCTTGGTTGA

Domains

Predicted by InterproScan.

• HlyD family secretion protein (HlyD_3) (314-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus gordonii str. Challis substr. CH1	98.894	100	0.989
comB	Streptococcus pneumoniae Rx1	56	99.558	0.558
comB	Streptococcus pneumoniae D39	56	99.558	0.558
comB	Streptococcus pneumoniae R6	56	99.558	0.558
comB	Streptococcus mitis NCTC 12261	55.778	99.558	0.555
comB	Streptococcus pneumoniae TIGR4	55.556	99.558	0.553
comB	Streptococcus mitis SK321	55.111	99.558	0.549