Detailed information NTG0247948

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: CO687_RS03335
• Genome accession: NZ_CP023511
• Coordinates: 677337..678986 (-)
• Length: 549 a.a.
• NCBI ID: WP_096754927.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain FDAARGOS_371
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 672337..683986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO687_RS03320 (CO687_03320)	rpsD	672674..673285 (+)	612	WP_008810013.1	30S ribosomal protein S4	-
CO687_RS03325 (CO687_03325)	comA	673697..675850 (+)	2154	WP_096754925.1	peptide cleavage/export ABC transporter ComA	Regulator
CO687_RS03330 (CO687_03330)	comB	675860..677218 (+)	1359	WP_096754926.1	competence pheromone export protein ComB	Regulator
CO687_RS03335 (CO687_03335)	lytF	677337..678986 (-)	1650	WP_096754927.1	GBS Bsp-like repeat-containing protein	Regulator
CO687_RS03340 (CO687_03340)	purD	679231..680490 (+)	1260	WP_096754928.1	phosphoribosylamine--glycine ligase	-
CO687_RS03345 (CO687_03345)	-	680550..681743 (+)	1194	WP_053794284.1	ATP-grasp domain-containing protein	-
CO687_RS03350 (CO687_03350)	purE	681763..682251 (+)	489	WP_053794285.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
CO687_RS03355 (CO687_03355)	purK	682238..683329 (+)	1092	WP_096754929.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
CO687_RS03360 (CO687_03360)	-	683331..683594 (+)	264	WP_096754930.1	hypothetical protein	-
CO687_RS03365 (CO687_03365)	-	683615..683845 (+)	231	WP_096754931.1	phosphoribosylaminoimidazole carboxylase	-

Sequence

Protein

• Length: 549 a.a.
• Molecular weight: 60373.18 Da
• Isoelectric Point: 9.3890

>NTDB_id=247948 CO687_RS03335 WP_096754927.1 677337..678986(-) (lytF) [Streptococcus gordonii strain FDAARGOS_371]
MKKYKNFLLLSATLLTSLSAPLAAANEQFSPSQLTAMTSEVSVQLEGQTAIVQYQPTAAQEAYTIQHAVWSEEGGQDDIV
WYSANQSTTRIDLSQHKGQGKFLIETYLNVNGIKYHLSSKSVFLNKPVQPAEKTVPEQQDSTSSNNATPQAPAEPKPTNP
APTPAPAPATNRVENPRNSYPKVEERNKSLPPQKVADPKAAPPQAKPNNNKPLQASAARVPAEPVRDSKPLISITNINKE
NGTYTVRVQESPYSKRIKSVQVPIWSTANQSNLKWYEASKTGNGSFSVQFDIRNHQQIYGNYINHVYITYEDGSRVGYVA
ENVNLPQPAPQPLTPSLQVVHKGQSNYQVILQNSFGDGHILFPIWSDINGQDDLRWYTANSLGNGRYSLDFNANNHIGDG
LYHVHVYRQSGGKVTGVMASNFQVTRPTVAVRKPLNHATDPSNTYPVGECTWGAKALAPWAGNWWGNGGDWAASARRAGF
RVGSTPQVGAIACWTDGGYGHVGVVTHVDSHKRIQIQESNYAGQRYIANFRGWFDPTISQGTVSYIYPN

Nucleotide

• Length: 1650 bp

>NTDB_id=247948 CO687_RS03335 WP_096754927.1 677337..678986(-) (lytF) [Streptococcus gordonii strain FDAARGOS_371]
ATGAAAAAATACAAAAATTTCTTACTGCTTTCAGCAACCTTGTTGACCTCACTATCTGCTCCCTTAGCTGCAGCGAATGA
GCAGTTTAGCCCATCCCAACTGACGGCTATGACCAGCGAAGTTTCCGTTCAGCTTGAAGGACAAACAGCGATTGTTCAGT
ACCAACCGACCGCTGCGCAAGAAGCTTATACTATCCAACATGCCGTCTGGTCTGAGGAGGGTGGCCAAGACGATATTGTC
TGGTATTCAGCTAATCAAAGCACGACCAGGATTGACTTGTCTCAGCACAAGGGCCAGGGCAAATTTCTCATTGAGACTTA
TCTCAATGTGAATGGTATCAAATATCACTTGAGTAGTAAATCGGTCTTTCTAAACAAGCCGGTTCAACCAGCCGAAAAAA
CTGTCCCTGAACAGCAAGACAGCACTTCGTCTAACAATGCCACACCTCAAGCACCGGCTGAGCCAAAACCAACTAACCCA
GCACCTACTCCAGCTCCGGCTCCCGCGACCAATAGAGTTGAAAATCCTCGGAACTCCTATCCAAAAGTCGAAGAGCGAAA
CAAATCTCTTCCTCCTCAAAAGGTAGCTGACCCAAAGGCGGCGCCCCCTCAGGCAAAGCCAAACAACAACAAACCTCTGC
AAGCTTCAGCTGCCAGAGTGCCGGCAGAACCTGTCAGAGACAGCAAACCACTCATCAGTATTACCAACATTAATAAGGAA
AATGGAACCTATACCGTAAGGGTCCAAGAAAGTCCTTATTCCAAGAGAATTAAAAGTGTACAAGTGCCTATTTGGAGCAC
CGCAAATCAAAGCAATCTTAAATGGTATGAGGCTTCAAAGACAGGTAACGGAAGCTTTTCCGTTCAATTCGATATCCGAA
ATCACCAGCAGATTTACGGCAACTATATCAATCACGTCTACATTACCTATGAAGACGGTAGCCGAGTTGGCTATGTTGCT
GAAAATGTCAATCTGCCTCAGCCAGCACCCCAACCACTAACTCCGAGTCTGCAAGTGGTCCATAAAGGTCAATCAAACTA
TCAAGTTATCTTACAAAATAGTTTCGGTGACGGCCATATCCTCTTCCCCATCTGGTCAGATATTAATGGCCAAGACGACC
TCCGCTGGTATACGGCTAATTCTCTTGGTAATGGGCGCTATTCGTTAGATTTCAACGCCAACAATCATATCGGTGACGGT
CTCTATCATGTCCATGTCTATCGACAATCTGGTGGGAAAGTAACTGGAGTCATGGCTTCTAATTTTCAAGTGACACGTCC
AACAGTAGCTGTGAGAAAACCTCTTAACCATGCAACCGATCCAAGTAACACCTACCCTGTTGGTGAATGTACATGGGGTG
CCAAGGCTCTCGCTCCTTGGGCAGGAAACTGGTGGGGAAATGGTGGGGACTGGGCAGCCAGTGCTCGCCGAGCAGGATTC
CGTGTAGGATCCACACCTCAGGTCGGAGCCATTGCCTGCTGGACTGACGGTGGATACGGACATGTCGGCGTCGTCACGCA
TGTTGATTCACATAAGCGTATCCAAATTCAGGAATCCAACTACGCTGGACAGCGCTATATCGCTAATTTCCGTGGCTGGT
TTGACCCAACCATCTCTCAGGGCACGGTTTCCTATATCTACCCAAATTAA

Domains

Predicted by InterproScan.

• CHAP domain (CHAP) (443-520)

• GBS Bsp-like repeat (GBS_Bsp-like) (344-414)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-319)

• GBS Bsp-like repeat (GBS_Bsp-like) (55-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii str. Challis substr. CH1	97.268	100	0.973
lytF	Streptococcus gordonii strain NCTC7865	95.993	100	0.96