Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CK627_RS21935 | Genome accession | NZ_CP023141 |
| Coordinates | 4761021..4761341 (+) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain KN-Mc-6U21 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4756021..4766341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK627_RS21910 (CK627_21910) | - | 4756658..4757293 (-) | 636 | WP_010636289.1 | hemolysin III family protein | - |
| CK627_RS21915 (CK627_21915) | - | 4757512..4759017 (+) | 1506 | WP_010636288.1 | pyridoxal-dependent decarboxylase | - |
| CK627_RS21920 (CK627_21920) | - | 4759122..4759685 (+) | 564 | WP_005309592.1 | septation protein A | - |
| CK627_RS21925 (CK627_21925) | - | 4759710..4760006 (+) | 297 | WP_095593382.1 | YciI family protein | - |
| CK627_RS21930 (CK627_21930) | cysQ | 4760084..4760854 (-) | 771 | WP_167385403.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| CK627_RS21935 (CK627_21935) | comEA | 4761021..4761341 (+) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| CK627_RS21940 (CK627_21940) | galU | 4761437..4762348 (+) | 912 | WP_095593384.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CK627_RS21945 (CK627_21945) | - | 4762562..4763959 (+) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| CK627_RS21950 (CK627_21950) | - | 4764032..4765003 (-) | 972 | WP_005309570.1 | response regulator | - |
| CK627_RS21955 (CK627_21955) | - | 4765359..4766036 (+) | 678 | WP_095593385.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=244941 CK627_RS21935 WP_005309580.1 4761021..4761341(+) (comEA) [Aeromonas dhakensis strain KN-Mc-6U21]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=244941 CK627_RS21935 WP_005309580.1 4761021..4761341(+) (comEA) [Aeromonas dhakensis strain KN-Mc-6U21]
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |