Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CK207_RS06205 | Genome accession | NZ_CP023054 |
| Coordinates | 1316054..1316353 (+) | Length | 99 a.a. |
| NCBI ID | WP_017044597.1 | Uniprot ID | A0A233HCF5 |
| Organism | Vibrio anguillarum strain VIB43 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1311054..1321353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK207_RS06190 (CK207_06190) | lon | 1311081..1313432 (+) | 2352 | WP_013857184.1 | endopeptidase La | - |
| CK207_RS06195 (CK207_06195) | - | 1313628..1313900 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| CK207_RS06200 (CK207_06200) | ppiD | 1314058..1315917 (+) | 1860 | WP_019282002.1 | peptidylprolyl isomerase | - |
| CK207_RS06205 (CK207_06205) | comEA | 1316054..1316353 (+) | 300 | WP_017044597.1 | ComEA family DNA-binding protein | Machinery gene |
| CK207_RS06210 (CK207_06210) | cmk | 1316517..1317197 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| CK207_RS06215 (CK207_06215) | rpsA | 1317301..1318971 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| CK207_RS06220 (CK207_06220) | ihfB | 1319047..1319331 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CK207_RS06225 (CK207_06225) | - | 1319473..1319748 (+) | 276 | WP_017044598.1 | lipopolysaccharide assembly protein LapA domain-containing protein | - |
| CK207_RS06230 (CK207_06230) | lapB | 1319768..1320937 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10776.69 Da Isoelectric Point: 9.6909
>NTDB_id=244608 CK207_RS06205 WP_017044597.1 1316054..1316353(+) (comEA) [Vibrio anguillarum strain VIB43]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=244608 CK207_RS06205 WP_017044597.1 1316054..1316353(+) (comEA) [Vibrio anguillarum strain VIB43]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
60.194 |
100 |
0.626 |
| comEA | Vibrio cholerae strain A1552 |
60.194 |
100 |
0.626 |
| comEA | Vibrio campbellii strain DS40M4 |
59.184 |
98.99 |
0.586 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60 |
90.909 |
0.545 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.179 |
100 |
0.455 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40.909 |
100 |
0.455 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |