Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CCZ37_RS08060 | Genome accession | NZ_CP022741 |
| Coordinates | 1761628..1761927 (-) | Length | 99 a.a. |
| NCBI ID | WP_094500258.1 | Uniprot ID | A0A223MYB2 |
| Organism | Vibrio qinghaiensis strain Q67 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1756628..1766927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCZ37_RS08035 (CCZ37_08020) | lapB | 1757042..1758211 (-) | 1170 | WP_094500257.1 | lipopolysaccharide assembly protein LapB | - |
| CCZ37_RS08040 (CCZ37_08025) | - | 1758231..1758506 (-) | 276 | WP_010317448.1 | lipopolysaccharide assembly protein LapA domain-containing protein | - |
| CCZ37_RS08045 (CCZ37_08030) | ihfB | 1758648..1758932 (-) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CCZ37_RS08050 (CCZ37_08035) | rpsA | 1759009..1760679 (-) | 1671 | WP_010317450.1 | 30S ribosomal protein S1 | - |
| CCZ37_RS08055 (CCZ37_08040) | cmk | 1760783..1761463 (-) | 681 | WP_017041991.1 | (d)CMP kinase | - |
| CCZ37_RS08060 (CCZ37_08045) | comEA | 1761628..1761927 (-) | 300 | WP_094500258.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CCZ37_RS08065 (CCZ37_08050) | ppiD | 1762064..1763923 (-) | 1860 | WP_094500259.1 | peptidylprolyl isomerase | - |
| CCZ37_RS08070 (CCZ37_08055) | - | 1764081..1764353 (-) | 273 | WP_005382341.1 | HU family DNA-binding protein | - |
| CCZ37_RS08075 (CCZ37_08060) | lon | 1764548..1766899 (-) | 2352 | WP_094500260.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10674.64 Da Isoelectric Point: 10.0137
>NTDB_id=242067 CCZ37_RS08060 WP_094500258.1 1761628..1761927(-) (comEA) [Vibrio qinghaiensis strain Q67]
MKLKTKLGLLLLSIVLPLSPALAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGAFKTKEDLS
LVKGIGAATVKQNAERIIL
MKLKTKLGLLLLSIVLPLSPALAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGAFKTKEDLS
LVKGIGAATVKQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=242067 CCZ37_RS08060 WP_094500258.1 1761628..1761927(-) (comEA) [Vibrio qinghaiensis strain Q67]
ATGAAATTGAAAACAAAACTCGGGTTGCTACTTCTAAGTATCGTATTGCCTCTTTCACCGGCATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACAGTTAATATCAATCAGGCCTCTGCTGAGGAAATTGCCACTCTATTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGCTTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCCACTGTTAAGCAAAATGCCGAGCGTATTATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGCTACTTCTAAGTATCGTATTGCCTCTTTCACCGGCATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACAGTTAATATCAATCAGGCCTCTGCTGAGGAAATTGCCACTCTATTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGCTTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCCACTGTTAAGCAAAATGCCGAGCGTATTATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
57.732 |
97.98 |
0.566 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
61.111 |
90.909 |
0.556 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.179 |
100 |
0.455 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40.909 |
100 |
0.455 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |