Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   CHF41_RS00105 Genome accession   NZ_CP022680
Coordinates   21204..22403 (-) Length   399 a.a.
NCBI ID   WP_119875441.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 16204..27403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS00085 - 16279..17187 (-) 909 WP_119875434.1 diacylglycerol/lipid kinase family protein -
  CHF41_RS00090 dnaN 17527..18663 (-) 1137 WP_119875436.1 DNA polymerase III subunit beta -
  CHF41_RS00095 dnaA 18848..20185 (-) 1338 WP_119875438.1 chromosomal replication initiator protein DnaA -
  CHF41_RS00100 spo0J 20383..21147 (-) 765 WP_119875439.1 ParB/RepB/Spo0J family partition protein Regulator
  CHF41_RS00105 htrA 21204..22403 (-) 1200 WP_119875441.1 S1C family serine protease Regulator
  CHF41_RS00110 rlmH 22576..23055 (+) 480 WP_119875442.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CHF41_RS00115 - 23080..23751 (+) 672 WP_119875444.1 YoaK family protein -
  CHF41_RS00135 - 24166..26763 (-) 2598 WP_119875446.1 YfhO family protein -

Sequence


Protein


Download         Length: 399 a.a.        Molecular weight: 42063.39 Da        Isoelectric Point: 5.0068

>NTDB_id=241537 CHF41_RS00105 WP_119875441.1 21204..22403(-) (htrA) [Streptococcus respiraculi strain HTS25]
MKKFFKVLLLLLIGFVGGLAGTLAAPLLQTNKQPTQVVETKKESEQTTVSKVQYNNENSTTSAVEKVQNAVVSVINYQKP
RDNGYRSILEENSNSDDLAVAGEGSGVIYKKTDKFAYLVTNTHVIAGAEKIDIQLASGEKVEGELIGSDTYADIAVIKIA
ADKVKTVAEFADSDKIKVGETAIAIGSPLGSLYANTVTQGIVSSLSRTVTSKAEDGQTISTNAIQTDTAINPGNSGGPLI
NIQGQVIGITSSKITSSSNSAAGVAVEGMGFAIPANDAVSIINQLEKNGKVIRPALGIKMANLSNLSTTQRQKAGIEDDS
LKAGIVVLSTQKGLPADGQLEQYDVITKIDGETVENISDLQSALYKHTVGDTISITYSRHGKENTINIKLTNSTEDLAN

Nucleotide


Download         Length: 1200 bp        

>NTDB_id=241537 CHF41_RS00105 WP_119875441.1 21204..22403(-) (htrA) [Streptococcus respiraculi strain HTS25]
ATGAAAAAATTTTTTAAAGTGTTACTTTTATTATTAATTGGTTTTGTCGGAGGATTAGCGGGAACACTTGCTGCACCCTT
ACTACAGACAAATAAGCAGCCAACACAAGTCGTTGAAACTAAAAAAGAAAGCGAACAAACAACGGTTAGTAAGGTACAAT
ACAATAATGAAAATTCAACAACCTCCGCTGTTGAAAAAGTACAAAATGCAGTAGTATCTGTCATTAACTACCAAAAACCA
CGCGATAATGGTTATCGCTCTATTTTAGAAGAAAATAGCAATTCAGATGATTTAGCCGTTGCTGGAGAAGGTTCTGGAGT
TATTTACAAAAAAACAGATAAATTTGCCTATCTTGTCACCAATACGCACGTCATTGCAGGAGCTGAAAAAATCGATATTC
AACTGGCTTCAGGTGAAAAAGTAGAAGGGGAGTTGATTGGATCCGATACTTATGCAGATATTGCCGTGATTAAAATCGCA
GCTGATAAGGTGAAAACCGTTGCTGAATTTGCCGACTCTGATAAGATTAAAGTTGGGGAAACAGCGATTGCGATTGGTAG
CCCGCTAGGGAGCCTCTATGCCAATACAGTAACGCAGGGAATTGTCTCTAGTCTTAGTCGTACAGTTACTTCAAAAGCAG
AAGACGGTCAGACTATTTCAACCAATGCTATTCAAACAGATACAGCTATTAACCCTGGAAATTCAGGTGGTCCGCTAATT
AATATTCAAGGACAGGTCATTGGGATTACCTCTAGCAAAATTACTTCTAGCTCAAATTCAGCAGCAGGAGTTGCCGTAGA
AGGAATGGGCTTTGCAATTCCAGCAAATGATGCTGTTAGCATCATCAATCAACTAGAGAAAAATGGGAAAGTTATCCGTC
CAGCATTAGGAATTAAAATGGCTAATTTAAGCAATCTTTCGACTACACAACGCCAAAAAGCAGGTATTGAAGATGATAGC
TTAAAAGCTGGTATCGTTGTTCTTTCTACTCAAAAAGGCCTACCAGCAGACGGTCAGTTGGAACAGTACGATGTCATTAC
CAAAATTGATGGTGAAACTGTTGAAAATATCAGCGACCTGCAAAGTGCTCTTTATAAACATACCGTTGGTGACACCATTT
CCATTACCTATTCTCGCCATGGAAAAGAAAACACAATTAACATCAAGTTGACCAATTCAACAGAAGACCTTGCAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.902

100

0.609

  htrA Streptococcus gordonii str. Challis substr. CH1

60.401

100

0.604

  htrA Streptococcus pneumoniae R6

58.186

99.499

0.579

  htrA Streptococcus pneumoniae TIGR4

58.186

99.499

0.579

  htrA Streptococcus mitis NCTC 12261

58.186

99.499

0.579

  htrA Streptococcus pneumoniae D39

58.186

99.499

0.579

  htrA Streptococcus pneumoniae Rx1

58.186

99.499

0.579


Multiple sequence alignment