Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CHF41_RS00100 Genome accession   NZ_CP022680
Coordinates   20383..21147 (-) Length   254 a.a.
NCBI ID   WP_119875439.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 15383..26147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS10255 - 15881..16033 (-) 153 WP_119875431.1 helix-turn-helix domain-containing protein -
  CHF41_RS00080 - 16079..16276 (-) 198 WP_119875432.1 DUF951 domain-containing protein -
  CHF41_RS00085 - 16279..17187 (-) 909 WP_119875434.1 diacylglycerol/lipid kinase family protein -
  CHF41_RS00090 dnaN 17527..18663 (-) 1137 WP_119875436.1 DNA polymerase III subunit beta -
  CHF41_RS00095 dnaA 18848..20185 (-) 1338 WP_119875438.1 chromosomal replication initiator protein DnaA -
  CHF41_RS00100 spo0J 20383..21147 (-) 765 WP_119875439.1 ParB/RepB/Spo0J family partition protein Regulator
  CHF41_RS00105 htrA 21204..22403 (-) 1200 WP_119875441.1 S1C family serine protease Regulator
  CHF41_RS00110 rlmH 22576..23055 (+) 480 WP_119875442.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CHF41_RS00115 - 23080..23751 (+) 672 WP_119875444.1 YoaK family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28702.05 Da        Isoelectric Point: 6.3599

>NTDB_id=241536 CHF41_RS00100 WP_119875439.1 20383..21147(-) (spo0J) [Streptococcus respiraculi strain HTS25]
MEELRYIAITDISPNPYQPRIHFDQEKLEELALSIRENGLIQPLIVRKSAIIGYELLAGERRLRASQLAGLTTVPVVVKD
LSDDDLLSQAIIENLQRSDLNPIEEATSYQRLIEKGLTHDEIAQIMGKSRPYITNILRLLQLSAPLIQAVEEGRLSQGHA
RLLIPYQAKEQEQWLHTILEKELSVRALEAALSTKKTKTIQPSKNLFVKEAEKNLQQLLGTAIDIQQKKNGGGTLSISFK
NAEEFERIIHTIIN

Nucleotide


Download         Length: 765 bp        

>NTDB_id=241536 CHF41_RS00100 WP_119875439.1 20383..21147(-) (spo0J) [Streptococcus respiraculi strain HTS25]
ATGGAAGAACTACGTTATATTGCAATCACTGACATCAGCCCCAATCCCTATCAACCACGGATTCATTTTGATCAAGAAAA
GCTAGAAGAACTAGCCTTATCGATTAGAGAAAACGGTCTAATTCAGCCCTTGATTGTCCGAAAATCAGCCATTATCGGCT
ACGAATTACTAGCAGGAGAAAGGAGACTTCGAGCCAGCCAATTGGCAGGTTTGACAACCGTTCCTGTAGTCGTCAAAGAC
TTGTCTGATGATGACTTGCTTTCTCAAGCTATTATTGAAAATCTGCAACGCTCTGACCTTAATCCGATTGAAGAAGCGAC
ATCTTATCAGCGCTTGATTGAAAAAGGCTTGACTCACGATGAAATTGCACAAATCATGGGCAAATCACGACCTTATATCA
CCAATATTCTACGCCTATTGCAGCTGTCTGCTCCCTTGATTCAAGCAGTGGAAGAAGGAAGACTATCACAAGGACACGCT
AGACTCCTAATTCCTTATCAAGCAAAAGAGCAAGAGCAATGGCTCCATACTATTCTTGAAAAAGAGCTGAGTGTCCGCGC
TTTAGAAGCAGCCCTGTCTACCAAAAAAACAAAAACAATTCAACCTAGCAAAAACCTCTTTGTCAAAGAAGCAGAAAAAA
ATCTCCAGCAACTATTGGGAACAGCTATTGACATTCAACAGAAAAAAAATGGCGGTGGTACCCTATCCATTTCCTTTAAA
AACGCTGAAGAATTCGAACGGATTATCCACACCATTATAAACTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.15

99.606

0.539

Multiple sequence alignment