Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CHN56_RS13995 | Genome accession | NZ_CP022654 |
| Coordinates | 2806040..2806636 (-) | Length | 198 a.a. |
| NCBI ID | WP_003151513.1 | Uniprot ID | I2CAH7 |
| Organism | Bacillus velezensis strain SCDB 291 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2801040..2811636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHN56_RS13970 (CHN56_02768) | - | 2801193..2801513 (-) | 321 | WP_003151506.1 | MazG-like family protein | - |
| CHN56_RS13975 (CHN56_02769) | - | 2801629..2802204 (+) | 576 | WP_015387658.1 | TIGR00730 family Rossman fold protein | - |
| CHN56_RS13980 (CHN56_02770) | - | 2802413..2803789 (-) | 1377 | WP_060674016.1 | MFS transporter | - |
| CHN56_RS13985 (CHN56_02771) | - | 2803832..2804962 (-) | 1131 | WP_094247465.1 | PrpF domain-containing protein | - |
| CHN56_RS13990 (CHN56_02772) | - | 2805136..2805996 (+) | 861 | WP_017418853.1 | LysR family transcriptional regulator | - |
| CHN56_RS13995 (CHN56_02773) | clpP | 2806040..2806636 (-) | 597 | WP_003151513.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CHN56_RS14000 (CHN56_02774) | - | 2806880..2807854 (-) | 975 | WP_015418285.1 | LacI family DNA-binding transcriptional regulator | - |
| CHN56_RS14005 (CHN56_02775) | - | 2808245..2809477 (+) | 1233 | WP_003151517.1 | MFS transporter | - |
| CHN56_RS14010 (CHN56_02776) | - | 2809492..2810961 (+) | 1470 | WP_094247466.1 | glycoside hydrolase family 32 protein | - |
| CHN56_RS14020 (CHN56_02778) | - | 2811311..2811622 (-) | 312 | WP_094247467.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21831.06 Da Isoelectric Point: 4.6982
>NTDB_id=241326 CHN56_RS13995 WP_003151513.1 2806040..2806636(-) (clpP) [Bacillus velezensis strain SCDB 291]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=241326 CHN56_RS13995 WP_003151513.1 2806040..2806636(-) (clpP) [Bacillus velezensis strain SCDB 291]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACGGAAGACCAGAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACGGAAGACCAGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.96 |
100 |
0.96 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus pneumoniae D39 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae Rx1 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae R6 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.216 |
97.98 |
0.561 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.639 |
97.98 |
0.535 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |