Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BaGK_RS18120 | Genome accession | NZ_CP022653 |
| Coordinates | 3660618..3661214 (+) | Length | 198 a.a. |
| NCBI ID | WP_003326811.1 | Uniprot ID | A0AAP3CU21 |
| Organism | Bacillus atrophaeus strain GQJK17 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3655618..3666214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BaGK_RS18085 (BaGK_18085) | aspP | 3655987..3657549 (+) | 1563 | WP_003326818.1 | aspartate/proton symporter AspP | - |
| BaGK_RS18090 (BaGK_18090) | - | 3657654..3658238 (+) | 585 | WP_003326817.1 | TetR family transcriptional regulator | - |
| BaGK_RS18095 (BaGK_18095) | - | 3658320..3658655 (+) | 336 | WP_010790011.1 | DMT family transporter | - |
| BaGK_RS18100 (BaGK_18100) | - | 3658655..3658969 (+) | 315 | WP_010790012.1 | DMT family transporter | - |
| BaGK_RS18105 (BaGK_18105) | speG | 3658995..3659522 (+) | 528 | Protein_3549 | spermidine N1-acetyltransferase | - |
| BaGK_RS18110 (BaGK_18110) | - | 3659609..3660094 (-) | 486 | WP_094232824.1 | DinB family protein | - |
| BaGK_RS18120 (BaGK_18120) | clpP | 3660618..3661214 (+) | 597 | WP_003326811.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| BaGK_RS18125 (BaGK_18125) | - | 3661248..3661856 (-) | 609 | WP_094232825.1 | DJ-1/PfpI family protein | - |
| BaGK_RS18130 (BaGK_18130) | - | 3661941..3662516 (-) | 576 | WP_088118028.1 | TIGR00730 family Rossman fold protein | - |
| BaGK_RS18135 (BaGK_18135) | - | 3662631..3662951 (+) | 321 | WP_010790015.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| BaGK_RS18140 (BaGK_18140) | - | 3662979..3664589 (-) | 1611 | WP_094232826.1 | SulP family inorganic anion transporter | - |
| BaGK_RS18145 (BaGK_18145) | - | 3664608..3665192 (-) | 585 | WP_094232827.1 | beta-class carbonic anhydrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21877.15 Da Isoelectric Point: 4.7114
>NTDB_id=241266 BaGK_RS18120 WP_003326811.1 3660618..3661214(+) (clpP) [Bacillus atrophaeus strain GQJK17]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=241266 BaGK_RS18120 WP_003326811.1 3660618..3661214(+) (clpP) [Bacillus atrophaeus strain GQJK17]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCAATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCTATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTTCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCAATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCTATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTTCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.455 |
100 |
0.955 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus thermophilus LMD-9 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.124 |
97.98 |
0.53 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |