Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   Sp14A_RS01430 Genome accession   NZ_CP022601
Coordinates   262861..264834 (+) Length   657 a.a.
NCBI ID   WP_115129653.1    Uniprot ID   A0A345VHP5
Organism   Streptococcus pluranimalium strain 14A0014     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 257861..269834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS01410 (Sp14A_02900) sufU 257868..258308 (+) 441 WP_115129649.1 Fe-S cluster assembly sulfur transfer protein SufU -
  Sp14A_RS01415 (Sp14A_02910) sufB 258550..259959 (+) 1410 WP_115129650.1 Fe-S cluster assembly protein SufB -
  Sp14A_RS01420 (Sp14A_02920) pbp3 260160..261398 (-) 1239 WP_115129651.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  Sp14A_RS01425 (Sp14A_02930) pbp3 261395..262660 (-) 1266 WP_115129652.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  Sp14A_RS01430 (Sp14A_02940) amiA 262861..264834 (+) 1974 WP_115129653.1 peptide ABC transporter substrate-binding protein Regulator
  Sp14A_RS01435 (Sp14A_02950) amiC 264900..266399 (+) 1500 WP_115129654.1 ABC transporter permease Regulator
  Sp14A_RS01440 (Sp14A_02960) amiD 266399..267325 (+) 927 WP_115129655.1 oligopeptide ABC transporter permease OppC Regulator
  Sp14A_RS01445 (Sp14A_02970) amiE 267334..268383 (+) 1050 WP_115129656.1 ABC transporter ATP-binding protein Regulator
  Sp14A_RS01450 (Sp14A_02980) amiF 268398..269327 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 657 a.a.        Molecular weight: 73144.80 Da        Isoelectric Point: 4.4516

>NTDB_id=241037 Sp14A_RS01430 WP_115129653.1 262861..264834(+) (amiA) [Streptococcus pluranimalium strain 14A0014]
MTSKKKLLALAGVALVSTSVLAACGNKSDSKKSDSMSYSYVYATDPKTLDYVTANGAETSELTANFVDGLLENDQYGNLI
PSLAKDWTVSEDGLTYTYKLRDDVYWYTADGEEYAPVTAEDFVTGLKHAADKKSDALYVVQDSVKGLKDYVDGKEKDFKN
VGVKAVDEHTVEYTLNKPESFWNSKTTYGILFPVNAEFLESKGDDFGSPTDPSSLLYNGAYTLSAITSKSSVEMTKNENY
WDADNVHITDVKLTYYDGSDPDSLFNNFKDGSYSFARLYPNQPSFKKASKEFGDNIYYGQQNASTYMYFFNVNRTANKMT
EKSPEQFEDTKEALQNKDFRQAVTFAFDRASWNSQVAGEEAKDKALRNTLVPPTFVQIDGKDFGDTVTKDLETLGDEWQG
VNLKDAQNGLYDPEKAKAELEKAKADLGSDVSYPIQIDTVVSQTDELGVQRAKSLKQSVESNLGKENVQINILEKSEEEY
LAATYNAESAEQMDYDITISGWSPDYLDPSSYLDIFSTAEGAASTMRLGIDSKNTELVQKVGLDKYQEHLDKASDITDDV
NARYTEYAKAQAWLSDSALVIPTISLGGTPGVTRIQPFTAPFSWVGNKGGTYIYKYQKVQDKPVTTSDYEKALEKWKTKR
DKSNEKATKELADHVAK

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=241037 Sp14A_RS01430 WP_115129653.1 262861..264834(+) (amiA) [Streptococcus pluranimalium strain 14A0014]
ATGACAAGTAAAAAGAAATTATTGGCATTAGCCGGTGTAGCACTTGTTTCTACATCCGTTTTAGCAGCTTGTGGTAATAA
ATCAGATTCAAAGAAATCAGATAGTATGTCATATAGCTATGTGTATGCAACAGATCCAAAAACTTTGGACTATGTAACGG
CTAACGGTGCAGAAACTAGTGAGCTTACTGCTAACTTTGTGGATGGTCTTTTAGAAAATGATCAATACGGAAATCTTATT
CCATCGTTGGCAAAAGACTGGACTGTTTCTGAAGACGGTTTAACTTATACTTATAAACTCCGTGATGATGTCTACTGGTA
TACTGCTGATGGTGAAGAATATGCTCCAGTTACAGCTGAAGACTTCGTAACAGGTCTAAAACATGCAGCAGATAAAAAAT
CTGATGCTCTCTATGTTGTCCAAGATTCTGTTAAAGGATTGAAGGACTACGTTGATGGAAAAGAAAAAGACTTTAAAAAC
GTAGGTGTTAAAGCAGTTGATGAGCACACTGTTGAGTATACGCTTAATAAACCTGAAAGTTTCTGGAACTCTAAAACTAC
TTATGGTATTCTTTTCCCAGTCAATGCAGAATTCTTAGAATCAAAAGGTGATGATTTTGGTTCGCCAACTGATCCATCAA
GTCTTTTGTATAATGGTGCTTATACATTGAGTGCTATCACTTCTAAATCATCTGTAGAAATGACTAAAAACGAAAACTAC
TGGGATGCAGACAATGTTCACATCACAGATGTTAAGTTGACCTACTATGATGGTTCAGATCCTGATTCACTCTTTAATAA
CTTCAAAGATGGATCATATAGTTTTGCCCGTCTTTATCCAAACCAACCAAGCTTCAAGAAAGCTTCTAAAGAGTTCGGCG
ACAACATCTACTATGGTCAACAAAATGCCTCAACTTACATGTACTTCTTCAATGTTAACCGTACAGCTAACAAAATGACG
GAAAAATCGCCAGAACAATTTGAAGATACGAAAGAAGCACTTCAAAACAAAGATTTCCGTCAAGCAGTTACCTTTGCCTT
TGACCGCGCGTCATGGAATTCTCAAGTAGCTGGTGAAGAAGCTAAAGATAAAGCCTTACGTAATACTCTCGTGCCACCGA
CCTTTGTTCAAATTGATGGTAAAGACTTCGGAGATACTGTAACTAAAGATTTAGAAACACTTGGTGATGAGTGGCAAGGT
GTTAATCTTAAAGATGCTCAGAATGGTTTGTACGATCCAGAAAAAGCCAAAGCTGAGCTTGAAAAGGCTAAAGCAGATCT
AGGATCTGATGTGTCATACCCAATTCAAATCGATACAGTAGTATCTCAAACAGATGAGCTTGGCGTTCAACGTGCGAAAT
CGTTGAAACAATCTGTTGAATCTAACTTGGGCAAAGAAAATGTTCAAATCAATATTCTTGAAAAATCTGAAGAAGAATAT
CTAGCAGCTACTTATAACGCTGAATCAGCAGAACAAATGGACTACGATATTACTATTTCAGGTTGGTCACCAGACTATCT
TGACCCATCTTCATACCTTGATATCTTCTCAACAGCAGAAGGTGCAGCATCAACAATGCGTCTAGGTATCGATTCTAAGA
ATACTGAGTTAGTCCAAAAAGTTGGCTTGGATAAATACCAAGAACACCTTGATAAAGCTTCTGACATTACTGACGATGTC
AATGCTCGTTACACTGAATATGCTAAAGCTCAAGCTTGGTTAAGTGATAGTGCTCTTGTTATCCCAACAATCTCACTTGG
TGGTACACCAGGAGTTACTCGTATTCAACCATTTACAGCACCATTCTCATGGGTCGGTAACAAAGGTGGAACTTACATTT
ACAAATATCAAAAAGTTCAAGACAAACCTGTTACAACAAGCGACTATGAAAAAGCTTTAGAAAAATGGAAAACTAAACGT
GACAAATCAAATGAAAAAGCTACAAAAGAATTAGCTGATCACGTTGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(79-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VHP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

51.446

100

0.514
  amiA3 Streptococcus thermophilus LMG 18311

50.989

100

0.51
  amiA3 Streptococcus thermophilus LMD-9

50.837

100

0.508

Multiple sequence alignment