Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   Sp14A_RS01435 Genome accession   NZ_CP022601
Coordinates   264900..266399 (+) Length   499 a.a.
NCBI ID   WP_115129654.1    Uniprot ID   A0A345VHP6
Organism   Streptococcus pluranimalium strain 14A0014     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 259900..271399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS01420 (Sp14A_02920) pbp3 260160..261398 (-) 1239 WP_115129651.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  Sp14A_RS01425 (Sp14A_02930) pbp3 261395..262660 (-) 1266 WP_115129652.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  Sp14A_RS01430 (Sp14A_02940) amiA 262861..264834 (+) 1974 WP_115129653.1 peptide ABC transporter substrate-binding protein Regulator
  Sp14A_RS01435 (Sp14A_02950) amiC 264900..266399 (+) 1500 WP_115129654.1 ABC transporter permease Regulator
  Sp14A_RS01440 (Sp14A_02960) amiD 266399..267325 (+) 927 WP_115129655.1 oligopeptide ABC transporter permease OppC Regulator
  Sp14A_RS01445 (Sp14A_02970) amiE 267334..268383 (+) 1050 WP_115129656.1 ABC transporter ATP-binding protein Regulator
  Sp14A_RS01450 (Sp14A_02980) amiF 268398..269327 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator
  Sp14A_RS01455 (Sp14A_02990) - 269629..271290 (+) 1662 WP_115129657.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 56081.13 Da        Isoelectric Point: 10.0377

>NTDB_id=241038 Sp14A_RS01435 WP_115129654.1 264900..266399(+) (amiC) [Streptococcus pluranimalium strain 14A0014]
MKKYILMRILRSLVSIFLVTTLVYTIVYTMVPKSLIFKNDPNYNKMITTPDKKSDYENTIFERMGYIDYMTTKELQEEAS
KEYKNVTTEPTKANKNTYQKFLSASSGKWQLHQFKESKEFYATRHISIFERVWKFYSNLIVIDHPWKIKDSSNPDLERYV
RFENDPAVGPALVGSGTQHKYLIYFNGSFPFVHQNIVKLNLGVSYPTYANQPVTRIITQGQGKTLQNEVTFPSGSTRNSA
INIYSRTYLSPSKADSQAKRNFGKDDAYTATQNNYSEPSMLKNSFIIGVIGVLIAYALGLPIGMLMSRYKDGWFDRLSTG
TMTFMLALPSVATIYIIRFLGGLVGLPDSFPILGASSPLSYVLPSLVLGILSVPGIVVWFRRYMVDQQASDYVRFARSKG
LSEAEISQKHLFKNAMVPISNGIPTSIAMTIVGATLTETIFAFPGMGKMLIDSVRAANNSMVVGLVFIFTVVSVFALLLG
DLLMTIFDPRIRLTSKGGK

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=241038 Sp14A_RS01435 WP_115129654.1 264900..266399(+) (amiC) [Streptococcus pluranimalium strain 14A0014]
ATGAAAAAATATATCTTAATGCGTATTTTGCGATCATTAGTTTCTATTTTTTTGGTAACAACACTGGTTTATACAATTGT
CTATACCATGGTACCGAAGAGTTTGATTTTTAAAAATGATCCCAACTATAATAAAATGATTACCACTCCGGACAAAAAAT
CGGATTATGAAAATACGATTTTTGAAAGGATGGGCTATATTGACTACATGACTACTAAAGAGCTTCAAGAAGAAGCTTCA
AAAGAATATAAAAATGTAACAACAGAGCCAACAAAAGCTAATAAAAACACGTATCAAAAGTTCTTATCAGCAAGTAGTGG
CAAGTGGCAATTGCACCAATTTAAGGAAAGTAAGGAATTTTACGCAACACGTCATATATCAATTTTTGAGCGTGTTTGGA
AGTTCTACTCAAATTTAATTGTGATTGATCATCCTTGGAAAATAAAAGATTCTTCGAACCCTGATTTGGAACGTTACGTT
CGTTTTGAAAATGATCCTGCTGTGGGTCCAGCTCTTGTTGGTTCAGGAACACAGCATAAGTATTTGATTTATTTTAATGG
TTCATTCCCATTTGTACATCAAAATATTGTTAAGCTCAATTTAGGAGTATCTTACCCAACCTATGCCAATCAGCCTGTTA
CTCGTATTATCACACAAGGACAGGGTAAAACGCTTCAAAATGAAGTCACTTTCCCAAGTGGTAGCACTCGAAACTCTGCC
ATCAATATCTATTCAAGAACTTATTTGTCACCTTCGAAAGCAGATTCTCAAGCCAAACGCAATTTTGGTAAAGATGATGC
CTACACAGCCACCCAAAACAATTACAGTGAACCGTCAATGCTGAAGAACTCTTTCATTATCGGTGTCATCGGTGTCTTGA
TAGCTTATGCATTAGGTTTACCGATTGGTATGTTAATGTCTCGCTACAAAGATGGTTGGTTTGATAGACTATCAACCGGA
ACAATGACCTTTATGTTGGCTTTGCCAAGTGTTGCGACAATCTATATTATCCGCTTCTTGGGTGGTCTTGTTGGTTTGCC
AGATAGTTTCCCAATTCTAGGAGCATCTAGCCCGCTTTCCTATGTACTACCATCTCTTGTTTTGGGGATTTTAAGTGTTC
CAGGTATCGTGGTTTGGTTCCGTCGTTATATGGTCGATCAACAGGCTAGTGATTATGTTCGCTTTGCTCGTTCAAAAGGA
CTTTCAGAAGCAGAAATTTCACAAAAACATTTATTTAAAAATGCTATGGTGCCCATTTCAAACGGTATTCCAACTTCAAT
TGCCATGACGATTGTAGGTGCTACATTGACAGAGACTATCTTCGCCTTTCCTGGTATGGGTAAAATGTTGATTGACTCTG
TACGAGCTGCTAATAACTCAATGGTTGTCGGTTTAGTCTTTATCTTTACAGTTGTATCTGTTTTCGCTTTGTTACTAGGC
GATCTCTTGATGACTATTTTCGACCCACGTATTCGATTGACTTCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VHP6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

62.525

100

0.625
  amiC Streptococcus thermophilus LMD-9

62.124

100

0.621
  amiC Streptococcus thermophilus LMG 18311

61.924

100

0.619

Multiple sequence alignment