Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   Sp14A_RS01445 Genome accession   NZ_CP022601
Coordinates   267334..268383 (+) Length   349 a.a.
NCBI ID   WP_115129656.1    Uniprot ID   A0A345VHP8
Organism   Streptococcus pluranimalium strain 14A0014     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 262334..273383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS01430 (Sp14A_02940) amiA 262861..264834 (+) 1974 WP_115129653.1 peptide ABC transporter substrate-binding protein Regulator
  Sp14A_RS01435 (Sp14A_02950) amiC 264900..266399 (+) 1500 WP_115129654.1 ABC transporter permease Regulator
  Sp14A_RS01440 (Sp14A_02960) amiD 266399..267325 (+) 927 WP_115129655.1 oligopeptide ABC transporter permease OppC Regulator
  Sp14A_RS01445 (Sp14A_02970) amiE 267334..268383 (+) 1050 WP_115129656.1 ABC transporter ATP-binding protein Regulator
  Sp14A_RS01450 (Sp14A_02980) amiF 268398..269327 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator
  Sp14A_RS01455 (Sp14A_02990) - 269629..271290 (+) 1662 WP_115129657.1 peptide ABC transporter substrate-binding protein -
  Sp14A_RS01460 (Sp14A_03000) - 271405..272319 (+) 915 WP_104967234.1 ABC transporter permease -
  Sp14A_RS01465 (Sp14A_03010) - 272330..273361 (+) 1032 WP_115129658.1 ABC transporter permease -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 38535.35 Da        Isoelectric Point: 5.6967

>NTDB_id=241040 Sp14A_RS01445 WP_115129656.1 267334..268383(+) (amiE) [Streptococcus pluranimalium strain 14A0014]
MKKTDNIILSAKDVVVEFDVRDRVLTAIRGVSLDLIEGEVLAVVGESGSGKSVLTKTFTGMLESNGRIASGSISYRGQEL
AGLKDHKEWAGIRGAKIATIFQDPMTSLDPIKSIGSQITEVIIKHQGKSKAEAKKMAISYMESVGIPEAEKRFKEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIKLLKDLQAEYSFTTIFITHDLGVVASIADKVAVMYAGDIVE
YGTVEDIFYDPRHPYTWSLLSSLPQLADETGVLFSIPGAPPSLYKPIKGDAFAPRSRYAMQIDFEEDAPKFAVTETHWAK
TWLLHPDAPKVEKPEAIQNLHEKISEKFN

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=241040 Sp14A_RS01445 WP_115129656.1 267334..268383(+) (amiE) [Streptococcus pluranimalium strain 14A0014]
ATGAAAAAAACAGATAATATTATTTTAAGTGCAAAAGATGTTGTTGTTGAATTCGATGTCCGTGACCGTGTTCTGACAGC
TATTCGAGGTGTTTCCCTTGATTTGATTGAAGGTGAAGTTCTAGCAGTCGTTGGGGAGTCAGGGTCTGGAAAATCGGTAT
TAACAAAGACTTTTACAGGAATGCTTGAAAGTAATGGTCGTATAGCCAGTGGTTCGATTTCTTATAGAGGACAAGAATTA
GCTGGATTAAAAGACCATAAAGAATGGGCAGGAATTCGTGGGGCTAAGATTGCAACGATTTTCCAAGATCCAATGACTTC
CTTAGATCCAATTAAATCGATAGGAAGTCAGATAACAGAAGTTATCATCAAGCATCAAGGAAAATCTAAAGCAGAAGCTA
AAAAAATGGCGATTTCATATATGGAAAGTGTAGGTATTCCAGAAGCAGAGAAACGTTTCAAAGAGTATCCTTTCCAATAC
TCTGGAGGAATGCGACAACGTATCGTTATTGCTATTGCCCTTGCATGTCGACCAGATATCCTGATTTGTGATGAACCCAC
AACAGCCTTGGATGTTACCATTCAAGCTCAGATCATCAAATTGTTGAAAGATTTACAAGCAGAATATAGCTTTACAACGA
TCTTTATCACTCACGATTTGGGTGTTGTTGCAAGCATTGCCGATAAAGTTGCAGTGATGTATGCAGGTGATATTGTTGAA
TATGGAACGGTCGAAGATATTTTCTATGACCCACGCCATCCATACACATGGAGCTTGTTATCAAGCTTGCCACAGCTAGC
AGATGAAACGGGAGTGTTGTTTTCTATTCCAGGAGCACCGCCATCATTATACAAACCTATAAAAGGCGATGCTTTTGCAC
CAAGATCACGCTATGCTATGCAAATTGATTTTGAAGAAGATGCGCCAAAATTTGCAGTTACAGAAACACACTGGGCAAAA
ACTTGGCTCTTGCATCCGGATGCACCAAAAGTTGAAAAACCAGAAGCTATTCAAAATCTACATGAAAAAATTTCAGAAAA
ATTCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A345VHP8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

82.558

98.567

0.814

  amiE Streptococcus thermophilus LMG 18311

80.814

98.567

0.797

  amiE Streptococcus thermophilus LMD-9

80.814

98.567

0.797

  oppD Streptococcus mutans UA159

55.655

96.275

0.536


Multiple sequence alignment