Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CHQ57_RS17620 | Genome accession | NZ_CP022550 |
| Coordinates | 3814273..3814593 (+) | Length | 106 a.a. |
| NCBI ID | WP_099994235.1 | Uniprot ID | - |
| Organism | Aeromonas salmonicida strain A527 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3809273..3819593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHQ57_RS17595 (CHQ57_17505) | trhA | 3809899..3810534 (-) | 636 | WP_021140622.1 | PAQR family membrane homeostasis protein TrhA | - |
| CHQ57_RS17600 (CHQ57_17510) | - | 3810759..3812294 (+) | 1536 | WP_099994231.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CHQ57_RS17605 (CHQ57_17515) | - | 3812380..3812931 (+) | 552 | WP_099994232.1 | septation protein A | - |
| CHQ57_RS17610 (CHQ57_17520) | - | 3812958..3813254 (+) | 297 | WP_099994233.1 | YciI family protein | - |
| CHQ57_RS17615 (CHQ57_17525) | cysQ | 3813336..3814106 (-) | 771 | WP_099994234.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| CHQ57_RS17620 (CHQ57_17530) | comEA | 3814273..3814593 (+) | 321 | WP_099994235.1 | ComEA family DNA-binding protein | Machinery gene |
| CHQ57_RS17625 (CHQ57_17535) | galU | 3814689..3815600 (+) | 912 | WP_099994236.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CHQ57_RS17630 (CHQ57_17540) | - | 3815814..3817211 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| CHQ57_RS17635 (CHQ57_17545) | - | 3817287..3818258 (-) | 972 | WP_099994237.1 | response regulator | - |
| CHQ57_RS17640 (CHQ57_17550) | - | 3818354..3818818 (-) | 465 | WP_197665895.1 | response regulator | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11201.04 Da Isoelectric Point: 9.6863
>NTDB_id=240630 CHQ57_RS17620 WP_099994235.1 3814273..3814593(+) (comEA) [Aeromonas salmonicida strain A527]
MNYKTLTATLLLSCLPLLSQPLLAADKSAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKSAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=240630 CHQ57_RS17620 WP_099994235.1 3814273..3814593(+) (comEA) [Aeromonas salmonicida strain A527]
ATGAACTATAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCTGCCGACAA
GTCGGCAGCCAAGCCAGCGACCACAGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGAAAATTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACCTTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTATAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCTGCCGACAA
GTCGGCAGCCAAGCCAGCGACCACAGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGAAAATTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACCTTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA | Legionella pneumophila str. Paris |
40.816 |
92.453 |
0.377 |
| comEA | Legionella pneumophila strain ERS1305867 |
40.816 |
92.453 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |