Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   CG712_RS01060 Genome accession   NZ_CP022547
Coordinates   193370..193558 (+) Length   62 a.a.
NCBI ID   WP_096811419.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain B59671     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 188370..198558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS01045 (CG712_01070) - 190057..191715 (-) 1659 WP_002948383.1 NFACT family protein -
  CG712_RS01050 (CG712_01075) - 192224..192709 (+) 486 WP_071417453.1 NUDIX hydrolase -
  CG712_RS01055 (CG712_01080) - 192713..192904 (+) 192 WP_011681104.1 hypothetical protein -
  CG712_RS01060 (CG712_01085) prx 193370..193558 (+) 189 WP_096811419.1 hypothetical protein Regulator
  CG712_RS01065 (CG712_01090) - 193865..194563 (+) 699 WP_232510023.1 TraX family protein -
  CG712_RS01070 (CG712_01095) - 194698..195246 (+) 549 WP_002948194.1 DJ-1 family glyoxalase III -
  CG712_RS01080 (CG712_01105) - 195518..196291 (+) 774 WP_041827027.1 dihydroorotate dehydrogenase electron transfer subunit -
  CG712_RS01085 (CG712_01110) - 196310..197257 (+) 948 WP_022096654.1 dihydroorotate dehydrogenase -
  CG712_RS01090 (CG712_01115) cas1 197396..198400 (+) 1005 WP_096811421.1 CRISPR-associated endonuclease Cas1 -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7149.11 Da        Isoelectric Point: 4.5720

>NTDB_id=240549 CG712_RS01060 WP_096811419.1 193370..193558(+) (prx) [Streptococcus thermophilus strain B59671]
MLTYDEFKEAMDKGFIKGDTVQIVRKNGKIYDYVLDGERVDPHETLSLEKVSDIIKELGKDN

Nucleotide


Download         Length: 189 bp        

>NTDB_id=240549 CG712_RS01060 WP_096811419.1 193370..193558(+) (prx) [Streptococcus thermophilus strain B59671]
ATGCTAACCTATGATGAATTTAAAGAGGCAATGGACAAGGGTTTTATTAAAGGTGATACTGTTCAGATTGTCCGAAAGAA
TGGTAAAATATATGACTACGTTTTAGACGGTGAACGAGTTGATCCACACGAAACATTGAGCTTAGAAAAGGTATCGGATA
TAATAAAGGAACTAGGCAAGGACAACTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

56.667

96.774

0.548

  prx Streptococcus pyogenes MGAS8232

56.667

96.774

0.548

  prx Streptococcus pyogenes MGAS315

56.667

96.774

0.548

  prx Streptococcus pyogenes MGAS315

55

96.774

0.532

  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5

  prx Streptococcus pyogenes MGAS315

68.182

70.968

0.484

  prx Streptococcus pyogenes MGAS315

75

64.516

0.484


Multiple sequence alignment