Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | Asalp_RS19725 | Genome accession | NZ_CP022426 |
| Coordinates | 4221155..4221475 (+) | Length | 106 a.a. |
| NCBI ID | WP_021140625.1 | Uniprot ID | T0QN50 |
| Organism | Aeromonas salmonicida subsp. pectinolytica 34mel | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4216155..4226475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Asalp_RS19700 (Asalp_38680) | - | 4216781..4217416 (-) | 636 | WP_021140622.1 | hemolysin III family protein | - |
| Asalp_RS19705 (Asalp_38690) | - | 4217641..4219176 (+) | 1536 | WP_021140623.1 | pyridoxal-dependent decarboxylase | - |
| Asalp_RS19710 (Asalp_38700) | - | 4219262..4219813 (+) | 552 | WP_005318063.1 | septation protein A | - |
| Asalp_RS19715 (Asalp_38710) | - | 4219840..4220136 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| Asalp_RS19720 (Asalp_38720) | cysQ | 4220218..4220988 (-) | 771 | WP_021140624.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| Asalp_RS19725 (Asalp_38730) | comEA | 4221155..4221475 (+) | 321 | WP_021140625.1 | ComEA family DNA-binding protein | Machinery gene |
| Asalp_RS19730 (Asalp_38740) | galU | 4221570..4222481 (+) | 912 | WP_021140626.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| Asalp_RS19735 (Asalp_38750) | - | 4222695..4224092 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| Asalp_RS19740 (Asalp_38760) | - | 4224168..4225139 (-) | 972 | WP_034524283.1 | response regulator | - |
| Asalp_RS19745 (Asalp_38770) | - | 4225235..4225699 (-) | 465 | WP_197665895.1 | response regulator | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.6863
>NTDB_id=239313 Asalp_RS19725 WP_021140625.1 4221155..4221475(+) (comEA) [Aeromonas salmonicida subsp. pectinolytica 34mel]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=239313 Asalp_RS19725 WP_021140625.1 4221155..4221475(+) (comEA) [Aeromonas salmonicida subsp. pectinolytica 34mel]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAAGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAAGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |