Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   B2G65_RS08565 Genome accession   NZ_CP022354
Coordinates   1627470..1628021 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GUR     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1622470..1633021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G65_RS08530 (B2G65_08535) - 1622474..1623217 (-) 744 WP_023610032.1 class I SAM-dependent DNA methyltransferase -
  B2G65_RS08535 (B2G65_08540) rsfS 1623265..1623618 (-) 354 WP_186433269.1 ribosome silencing factor -
  B2G65_RS08540 (B2G65_08545) yqeK 1623642..1624235 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  B2G65_RS08545 (B2G65_08550) - 1624232..1624864 (-) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  B2G65_RS08550 (B2G65_08555) yhbY 1624933..1625241 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  B2G65_RS08555 (B2G65_08560) yqeH 1625266..1626384 (-) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  B2G65_RS08560 (B2G65_08565) - 1626384..1626911 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  B2G65_RS08565 (B2G65_08570) comX/sigX/comX2/sigX2 1627470..1628021 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=238707 B2G65_RS08565 WP_010921894.1 1627470..1628021(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain GUR]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=238707 B2G65_RS08565 WP_010921894.1 1627470..1628021(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain GUR]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.