Detailed information NTG0238530

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: CCX84_RS11550
• Genome accession: NZ_CP022345
• Coordinates: 2145517..2146098 (+)
• Length: 193 a.a.
• NCBI ID: WP_061139190.1
• Uniprot ID: A0A9X7QK77
• Organism: Bacillus thuringiensis strain c25
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2140517..2151098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCX84_RS11525	-	2141636..2143003 (+)	1368	WP_001065164.1	lytic polysaccharide monooxygenase	-
CCX84_RS11530	-	2143130..2143564 (-)	435	WP_061139189.1	GNAT family N-acetyltransferase	-
CCX84_RS11535	rpiA	2143679..2144341 (-)	663	WP_001049987.1	ribose 5-phosphate isomerase A	-
CCX84_RS11540	-	2144346..2144666 (-)	321	WP_001125395.1	2Fe-2S iron-sulfur cluster-binding protein	-
CCX84_RS11545	-	2144809..2145495 (+)	687	WP_000337516.1	RNA polymerase subunit sigma-70	-
CCX84_RS11550	clpP	2145517..2146098 (+)	582	WP_061139190.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
CCX84_RS11555	-	2146145..2147002 (-)	858	WP_001227619.1	glycine betaine ABC transporter substrate-binding protein	-
CCX84_RS11560	-	2147174..2148379 (+)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
CCX84_RS11565	-	2148372..2149208 (+)	837	WP_001084760.1	proline/glycine betaine ABC transporter permease	-
CCX84_RS30130	-	2149262..2149498 (-)	237	WP_000283222.1	hypothetical protein	-
CCX84_RS11575	-	2149716..2149883 (+)	168	WP_002196584.1	hypothetical protein	-
CCX84_RS11580	-	2149975..2150475 (+)	501	WP_002005170.1	HIT family protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21161.44 Da
• Isoelectric Point: 5.3277

>NTDB_id=238530 CCX84_RS11550 WP_061139190.1 2145517..2146098(+) (clpP) [Bacillus thuringiensis strain c25]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDA
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDNVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=238530 CCX84_RS11550 WP_061139190.1 2145517..2146098(+) (clpP) [Bacillus thuringiensis strain c25]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCCCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATGCG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TAACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	98.964	0.674
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.667	97.927	0.653
clpP	Streptococcus thermophilus LMD-9	54.688	99.482	0.544
clpP	Streptococcus thermophilus LMG 18311	54.688	99.482	0.544
clpP	Streptococcus pneumoniae R6	55.556	97.927	0.544
clpP	Streptococcus pneumoniae TIGR4	55.556	97.927	0.544
clpP	Streptococcus pneumoniae Rx1	55.556	97.927	0.544
clpP	Streptococcus pyogenes JRS4	55.556	97.927	0.544
clpP	Streptococcus pyogenes MGAS315	55.556	97.927	0.544
clpP	Streptococcus pneumoniae D39	55.556	97.927	0.544
clpP	Streptococcus mutans UA159	53.439	97.927	0.523
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	97.927	0.508
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	49.735	97.927	0.487