Detailed information NTG0238335

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: CFN77_RS16830
• Genome accession: NZ_CP022319
• Coordinates: 3257798..3258379 (-)
• Length: 193 a.a.
• NCBI ID: WP_414635072.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SGAir0031
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3252798..3263379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFN77_RS16795 (CFN77_16960)	fliW	3252934..3253368 (-)	435	WP_096881921.1	flagellar assembly protein FliW	-
CFN77_RS16800 (CFN77_16965)	-	3253397..3253975 (-)	579	WP_024719238.1	DUF6470 family protein	-
CFN77_RS16805 (CFN77_16970)	flgL	3254022..3254933 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
CFN77_RS16810 (CFN77_16975)	flgK	3254942..3256462 (-)	1521	WP_024719239.1	flagellar hook-associated protein FlgK	-
CFN77_RS16815 (CFN77_16980)	-	3256478..3256960 (-)	483	WP_007499977.1	flagellar protein FlgN	-
CFN77_RS16820 (CFN77_16985)	flgM	3256979..3257242 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
CFN77_RS16825 (CFN77_16990)	-	3257322..3257741 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
CFN77_RS16830 (CFN77_16995)	comFC	3257798..3258379 (-)	582	WP_414635072.1	ComF family protein	Machinery gene
CFN77_RS16835 (CFN77_17000)	-	3258481..3258774 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
CFN77_RS16840 (CFN77_17005)	comFA	3258839..3260218 (-)	1380	WP_152032909.1	DEAD/DEAH box helicase	Machinery gene
CFN77_RS16845 (CFN77_17010)	-	3260338..3261180 (-)	843	WP_096881922.1	DegV family protein	-
CFN77_RS16850 (CFN77_17015)	degU	3261392..3262081 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
CFN77_RS16855 (CFN77_17020)	degS	3262146..3263321 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 22066.76 Da
• Isoelectric Point: 10.5288

>NTDB_id=238335 CFN77_RS16830 WP_414635072.1 3257798..3258379(-) (comFC) [Bacillus altitudinis strain SGAir0031]
MKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYAYNDFMKDILARFKFRGDTALADLFKKDVQSAFKRS
FSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVHQSKQSKKRKNERLHQQNLFQLRQSNPIVLKDVILI
DDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 582 bp

>NTDB_id=238335 CFN77_RS16830 WP_414635072.1 3257798..3258379(-) (comFC) [Bacillus altitudinis strain SGAir0031]
ATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATCAATTGTGTCAGGATTGTTCAAGGTG
GGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCTTACAACGACTTTATGAAAGATATTC
TAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGATGTACAGTCAGCGTTTAAACGTTCT
TTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAAAGGAAAGAGGATTCAATCAGTCAAT
GATGCTTGCTTCCATGATTGGCGGACCTATATTGGAACCACTTATAAAAGTACATCAAAGTAAGCAGTCTAAGAAAAGAA
AAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGATCGTTCTAAAGGATGTCATATTAATC
GATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAGACGCAGGCGCCAAAAGTGTTTCCTC
TTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (126-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	51.813	100	0.518
comFC/cflB	Streptococcus mitis SK321	38.743	98.964	0.383
comFC/cflB	Streptococcus mitis NCTC 12261	38.22	98.964	0.378
comFC/cflB	Streptococcus pneumoniae TIGR4	37.696	98.964	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.696	98.964	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.696	98.964	0.373
comFC/cflB	Streptococcus pneumoniae R6	37.696	98.964	0.373