Detailed information NTG0238334

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: CFN77_RS16410
• Genome accession: NZ_CP022319
• Coordinates: 3172909..3173505 (+)
• Length: 198 a.a.
• NCBI ID: WP_024719872.1
• Uniprot ID: A0A2G8ISB7
• Organism: Bacillus altitudinis strain SGAir0031
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3167909..3178505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFN77_RS16390 (CFN77_16545)	-	3169364..3170533 (-)	1170	WP_096881885.1	macrolide family glycosyltransferase	-
CFN77_RS16395 (CFN77_16550)	-	3170702..3171592 (-)	891	WP_234833637.1	ABC transporter substrate-binding protein	-
CFN77_RS16400 (CFN77_16555)	-	3171822..3172286 (-)	465	WP_096881887.1	DinB family protein	-
CFN77_RS16410 (CFN77_16565)	clpP	3172909..3173505 (+)	597	WP_024719872.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
CFN77_RS16415 (CFN77_16570)	-	3173561..3174139 (-)	579	WP_024719873.1	TIGR00730 family Rossman fold protein	-
CFN77_RS16420 (CFN77_16575)	-	3174276..3174617 (+)	342	WP_096881888.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
CFN77_RS16425 (CFN77_16580)	-	3174647..3176269 (-)	1623	WP_061420267.1	SulP family inorganic anion transporter	-
CFN77_RS16430 (CFN77_16585)	-	3176307..3176888 (-)	582	WP_096881889.1	beta-class carbonic anhydrase	-
CFN77_RS16435 (CFN77_16590)	-	3177452..3178429 (+)	978	WP_234833500.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6905

>NTDB_id=238334 CFN77_RS16410 WP_024719872.1 3172909..3173505(+) (clpP) [Bacillus altitudinis strain SGAir0031]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=238334 CFN77_RS16410 WP_024719872.1 3172909..3173505(+) (clpP) [Bacillus altitudinis strain SGAir0031]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTCCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A2G8ISB7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.929	100	0.929
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.701	97.98	0.556
clpP	Streptococcus pneumoniae Rx1	56.186	97.98	0.551
clpP	Streptococcus pneumoniae D39	56.186	97.98	0.551
clpP	Streptococcus pneumoniae R6	56.186	97.98	0.551
clpP	Streptococcus pneumoniae TIGR4	56.186	97.98	0.551
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.639	97.98	0.535