Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   M6_RS06005 Genome accession   NC_006086
Coordinates   1200261..1200443 (-) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS10394     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1195261..1205443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M6_RS05990 (M6_Spy1190) - 1195699..1196394 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  M6_RS05995 (M6_Spy1191) - 1196633..1197568 (+) 936 WP_010922443.1 dihydroorotate oxidase -
  M6_RS06000 (M6_Spy1193) - 1197868..1199730 (-) 1863 WP_011184725.1 heavy metal translocating P-type ATPase -
  M6_RS06005 (M6_Spy1194) prx 1200261..1200443 (-) 183 WP_011184726.1 hypothetical protein Regulator
  M6_RS06010 (M6_Spy1195) mf2 1200683..1201441 (+) 759 WP_011184727.1 DNase Mf2 -
  M6_RS06015 (M6_Spy1196) speC 1201552..1202259 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  M6_RS10265 - 1202328..1202750 (-) 423 WP_410204536.1 SH3 domain-containing protein -
  M6_RS06020 (M6_Spy1197) - 1202763..1204394 (-) 1632 Protein_1167 IS1182 family transposase -
  M6_RS06025 (M6_Spy1198) - 1204433..1204642 (-) 210 WP_011184729.1 hypothetical protein -
  M6_RS06035 (M6_Spy1199) - 1204760..1205215 (-) 456 WP_011184730.1 phage holin family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=23798 M6_RS06005 WP_011184726.1 1200261..1200443(-) (prx) [Streptococcus pyogenes MGAS10394]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=23798 M6_RS06005 WP_011184726.1 1200261..1200443(-) (prx) [Streptococcus pyogenes MGAS10394]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5

Multiple sequence alignment