Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   CFA72_RS03285 Genome accession   NZ_CP022206
Coordinates   594370..594552 (+) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GURSA1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 589370..599552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFA72_RS03260 (CFA72_03260) - 589852..591057 (+) 1206 WP_093974603.1 glucosaminidase domain-containing protein -
  CFA72_RS03265 (CFA72_03265) - 591197..591721 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  CFA72_RS03270 (CFA72_03270) - 591709..592575 (+) 867 WP_011888701.1 DUF334 domain-containing protein -
  CFA72_RS03280 (CFA72_03280) sda3 593332..594132 (-) 801 WP_011285611.1 streptodornase Sda3 -
  CFA72_RS03285 (CFA72_03285) prx 594370..594552 (+) 183 WP_011184907.1 hypothetical protein Regulator
  CFA72_RS03290 (CFA72_03290) rlmD 594743..596098 (+) 1356 WP_023610126.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  CFA72_RS03295 (CFA72_03295) rocA 596762..598117 (+) 1356 WP_020837522.1 transcriptional regulator RocA -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=237551 CFA72_RS03285 WP_011184907.1 594370..594552(+) (prx) [Streptococcus pyogenes strain GURSA1]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=237551 CFA72_RS03285 WP_011184907.1 594370..594552(+) (prx) [Streptococcus pyogenes strain GURSA1]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment