Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   CFA72_RS01920 Genome accession   NZ_CP022206
Coordinates   338024..338203 (+) Length   59 a.a.
NCBI ID   WP_093974554.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GURSA1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 333024..343203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFA72_RS01890 (CFA72_01890) - 333398..333958 (+) 561 WP_232504207.1 AP2 domain-containing protein -
  CFA72_RS01895 (CFA72_01895) - 334071..334712 (+) 642 Protein_325 CHAP domain-containing protein -
  CFA72_RS01900 (CFA72_01900) - 334851..335375 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  CFA72_RS01905 (CFA72_01905) - 335363..336229 (+) 867 WP_011888701.1 DUF334 domain-containing protein -
  CFA72_RS01915 (CFA72_01915) sda3 336986..337786 (-) 801 WP_011285611.1 streptodornase Sda3 -
  CFA72_RS01920 (CFA72_01920) prx 338024..338203 (+) 180 WP_093974554.1 Paratox Regulator
  CFA72_RS01925 (CFA72_01925) - 338548..338922 (-) 375 WP_002988207.1 helix-turn-helix domain-containing protein -
  CFA72_RS01930 (CFA72_01930) - 339092..339313 (+) 222 WP_002988211.1 helix-turn-helix domain-containing protein -
  CFA72_RS01935 (CFA72_01935) - 339393..341675 (-) 2283 WP_023609925.1 Xaa-Pro dipeptidyl-peptidase -
  CFA72_RS01940 (CFA72_01940) - 341697..342356 (-) 660 WP_014635687.1 Crp/Fnr family transcriptional regulator -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6834.94 Da        Isoelectric Point: 4.2331

>NTDB_id=237542 CFA72_RS01920 WP_093974554.1 338024..338203(+) (prx) [Streptococcus pyogenes strain GURSA1]
MLTYDEFKQAIDRGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVLMELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=237542 CFA72_RS01920 WP_093974554.1 338024..338203(+) (prx) [Streptococcus pyogenes strain GURSA1]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGCTAATGGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

72.414

98.305

0.712
  prx Streptococcus pyogenes MGAS8232

72.414

98.305

0.712
  prx Streptococcus pyogenes MGAS315

88.095

71.186

0.627
  prx Streptococcus pyogenes MGAS315

85.366

69.492

0.593
  prx Streptococcus pyogenes MGAS315

75.61

69.492

0.525

Multiple sequence alignment