Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CEQ50_RS05700 | Genome accession | NZ_CP022103 |
| Coordinates | 1225358..1225657 (+) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum strain CNEVA NB11008 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1220358..1230657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ50_RS05685 (CEQ50_05700) | lon | 1220385..1222736 (+) | 2352 | WP_088728763.1 | endopeptidase La | - |
| CEQ50_RS05690 (CEQ50_05705) | - | 1222932..1223204 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| CEQ50_RS05695 (CEQ50_05710) | ppiD | 1223362..1225221 (+) | 1860 | WP_088732180.1 | peptidylprolyl isomerase | - |
| CEQ50_RS05700 (CEQ50_05715) | comEA | 1225358..1225657 (+) | 300 | WP_017047776.1 | ComEA family DNA-binding protein | Machinery gene |
| CEQ50_RS05705 (CEQ50_05720) | cmk | 1225821..1226501 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| CEQ50_RS05710 (CEQ50_05725) | rpsA | 1226605..1228275 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| CEQ50_RS05715 (CEQ50_05730) | ihfB | 1228352..1228636 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CEQ50_RS05720 (CEQ50_05735) | - | 1228778..1229053 (+) | 276 | WP_017044598.1 | LapA family protein | - |
| CEQ50_RS05725 (CEQ50_05740) | lapB | 1229073..1230242 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=236826 CEQ50_RS05700 WP_017047776.1 1225358..1225657(+) (comEA) [Vibrio anguillarum strain CNEVA NB11008]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=236826 CEQ50_RS05700 WP_017047776.1 1225358..1225657(+) (comEA) [Vibrio anguillarum strain CNEVA NB11008]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |