Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CEJ46_RS05610 | Genome accession | NZ_CP022101 |
| Coordinates | 1205536..1205835 (+) | Length | 99 a.a. |
| NCBI ID | WP_017044597.1 | Uniprot ID | A0A233HCF5 |
| Organism | Vibrio anguillarum strain JLL237 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1200536..1210835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEJ46_RS05595 (CEJ46_05595) | lon | 1200562..1202913 (+) | 2352 | WP_013857184.1 | endopeptidase La | - |
| CEJ46_RS05600 (CEJ46_05600) | - | 1203109..1203381 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| CEJ46_RS05605 (CEJ46_05605) | ppiD | 1203540..1205399 (+) | 1860 | WP_088721116.1 | peptidylprolyl isomerase | - |
| CEJ46_RS05610 (CEJ46_05610) | comEA | 1205536..1205835 (+) | 300 | WP_017044597.1 | ComEA family DNA-binding protein | Machinery gene |
| CEJ46_RS05615 (CEJ46_05615) | cmk | 1205997..1206677 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| CEJ46_RS05620 (CEJ46_05620) | rpsA | 1206781..1208451 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| CEJ46_RS05625 (CEJ46_05625) | ihfB | 1208528..1208812 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CEJ46_RS05630 (CEJ46_05630) | - | 1208954..1209229 (+) | 276 | WP_017044598.1 | LapA family protein | - |
| CEJ46_RS05635 (CEJ46_05635) | lapB | 1209249..1210418 (+) | 1170 | WP_088721117.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10776.69 Da Isoelectric Point: 9.6909
>NTDB_id=236778 CEJ46_RS05610 WP_017044597.1 1205536..1205835(+) (comEA) [Vibrio anguillarum strain JLL237]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=236778 CEJ46_RS05610 WP_017044597.1 1205536..1205835(+) (comEA) [Vibrio anguillarum strain JLL237]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGTGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGTATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGTGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGTATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
60.194 |
100 |
0.626 |
| comEA | Vibrio cholerae strain A1552 |
60.194 |
100 |
0.626 |
| comEA | Vibrio campbellii strain DS40M4 |
59.184 |
98.99 |
0.586 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60 |
90.909 |
0.545 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.179 |
100 |
0.455 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40.909 |
100 |
0.455 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |