Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CEG15_RS05080 | Genome accession | NZ_CP022099 |
| Coordinates | 1094485..1094784 (+) | Length | 99 a.a. |
| NCBI ID | WP_017044597.1 | Uniprot ID | A0A233HCF5 |
| Organism | Vibrio anguillarum strain S3 4/9 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1089485..1099784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEG15_RS05065 (CEG15_05065) | lon | 1089512..1091863 (+) | 2352 | WP_088728763.1 | endopeptidase La | - |
| CEG15_RS05070 (CEG15_05070) | - | 1092059..1092331 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| CEG15_RS05075 (CEG15_05075) | ppiD | 1092489..1094348 (+) | 1860 | WP_088728764.1 | peptidylprolyl isomerase | - |
| CEG15_RS05080 (CEG15_05080) | comEA | 1094485..1094784 (+) | 300 | WP_017044597.1 | ComEA family DNA-binding protein | Machinery gene |
| CEG15_RS05085 (CEG15_05085) | cmk | 1094948..1095628 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| CEG15_RS05090 (CEG15_05090) | rpsA | 1095732..1097402 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| CEG15_RS05095 (CEG15_05095) | ihfB | 1097479..1097763 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CEG15_RS05100 (CEG15_05100) | - | 1097905..1098180 (+) | 276 | WP_088728765.1 | LapA family protein | - |
| CEG15_RS05105 (CEG15_05105) | lapB | 1098200..1099369 (+) | 1170 | WP_088728766.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10776.69 Da Isoelectric Point: 9.6909
>NTDB_id=236730 CEG15_RS05080 WP_017044597.1 1094485..1094784(+) (comEA) [Vibrio anguillarum strain S3 4/9]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=236730 CEG15_RS05080 WP_017044597.1 1094485..1094784(+) (comEA) [Vibrio anguillarum strain S3 4/9]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGTATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATTATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGTATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATTATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
60.194 |
100 |
0.626 |
| comEA | Vibrio cholerae strain A1552 |
60.194 |
100 |
0.626 |
| comEA | Vibrio campbellii strain DS40M4 |
59.184 |
98.99 |
0.586 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60 |
90.909 |
0.545 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.179 |
100 |
0.455 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40.909 |
100 |
0.455 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |