Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CEP64_RS19660 | Genome accession | NZ_CP022046 |
| Coordinates | 1096200..1096517 (+) | Length | 105 a.a. |
| NCBI ID | WP_037588275.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain FDAARGOS_285 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1091200..1101517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP64_RS19620 (CEP64_05565) | - | 1091344..1091535 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| CEP64_RS19625 (CEP64_05570) | - | 1091532..1092503 (+) | 972 | WP_048539719.1 | ROK family glucokinase | - |
| CEP64_RS19630 (CEP64_05575) | - | 1092503..1092817 (+) | 315 | WP_078355840.1 | MTH1187 family thiamine-binding protein | - |
| CEP64_RS19635 (CEP64_05580) | - | 1092847..1093086 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| CEP64_RS19640 (CEP64_05585) | - | 1093184..1093816 (+) | 633 | WP_078355839.1 | MBL fold metallo-hydrolase | - |
| CEP64_RS19645 (CEP64_05590) | - | 1093851..1094099 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| CEP64_RS19650 (CEP64_05595) | comGA | 1094253..1095155 (+) | 903 | WP_078355838.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CEP64_RS19655 (CEP64_05600) | comGB | 1095145..1096185 (+) | 1041 | WP_088592324.1 | competence type IV pilus assembly protein ComGB | - |
| CEP64_RS19660 (CEP64_05605) | comGC | 1096200..1096517 (+) | 318 | WP_037588275.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CEP64_RS19665 (CEP64_05610) | comGD | 1096495..1096944 (+) | 450 | WP_084755672.1 | competence type IV pilus minor pilin ComGD | - |
| CEP64_RS19670 (CEP64_05615) | comGE | 1096928..1097209 (+) | 282 | WP_048539723.1 | competence type IV pilus minor pilin ComGE | - |
| CEP64_RS19675 (CEP64_05620) | - | 1097184..1097618 (+) | 435 | WP_048539724.1 | competence type IV pilus minor pilin ComGF | - |
| CEP64_RS19680 (CEP64_05625) | - | 1097853..1098341 (+) | 489 | WP_048539725.1 | shikimate kinase | - |
| CEP64_RS19685 (CEP64_05630) | gcvT | 1098534..1099622 (+) | 1089 | WP_078355834.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CEP64_RS19690 (CEP64_05635) | gcvPA | 1099634..1100977 (+) | 1344 | WP_048539727.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11591.65 Da Isoelectric Point: 8.5043
>NTDB_id=236156 CEP64_RS19660 WP_037588275.1 1096200..1096517(+) (comGC) [Mammaliicoccus sciuri strain FDAARGOS_285]
MKRFKFLSKKEGFTLVEMLIVLLIISILLVIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
YINQKQLTCKSGETITLENGEVVAH
MKRFKFLSKKEGFTLVEMLIVLLIISILLVIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
YINQKQLTCKSGETITLENGEVVAH
Nucleotide
Download Length: 318 bp
>NTDB_id=236156 CEP64_RS19660 WP_037588275.1 1096200..1096517(+) (comGC) [Mammaliicoccus sciuri strain FDAARGOS_285]
ATGAAAAGATTTAAATTTTTAAGTAAAAAAGAAGGATTTACATTGGTTGAGATGCTAATTGTCCTTTTAATCATAAGTAT
ATTATTGGTGATCATCATACCAAACATAAGTAAGCAATCAGAGACTGTAAAAAGTACTGGATGCCAAGCTCAAGTGAAAA
TGGTTGCTGGTCAAGTAGAAGCTTATACATTGAAGCACGACGCTAAACCAAATTCTATAAATGATTTAGTAAGTGATGGT
TATATTAATCAAAAGCAACTGACATGTAAATCAGGTGAGACAATTACACTTGAAAATGGTGAAGTTGTTGCACATTAA
ATGAAAAGATTTAAATTTTTAAGTAAAAAAGAAGGATTTACATTGGTTGAGATGCTAATTGTCCTTTTAATCATAAGTAT
ATTATTGGTGATCATCATACCAAACATAAGTAAGCAATCAGAGACTGTAAAAAGTACTGGATGCCAAGCTCAAGTGAAAA
TGGTTGCTGGTCAAGTAGAAGCTTATACATTGAAGCACGACGCTAAACCAAATTCTATAAATGATTTAGTAAGTGATGGT
TATATTAATCAAAAGCAACTGACATGTAAATCAGGTGAGACAATTACACTTGAAAATGGTGAAGTTGTTGCACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
64.706 |
97.143 |
0.629 |
| comGC | Staphylococcus aureus MW2 |
64.706 |
97.143 |
0.629 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
47.312 |
88.571 |
0.419 |
| comYC | Streptococcus mutans UA159 |
49.425 |
82.857 |
0.41 |
| comYC | Streptococcus mutans UA140 |
49.425 |
82.857 |
0.41 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
48.837 |
81.905 |
0.4 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
46.988 |
79.048 |
0.371 |
| comGC/cglC | Streptococcus mitis SK321 |
46.988 |
79.048 |
0.371 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.914 |
77.143 |
0.362 |
| comYC | Streptococcus suis isolate S10 |
48.718 |
74.286 |
0.362 |